DRSC/TRiP Functional Genomics Resources

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Protein Alignment Stoml2 and Stom

DIOPT Version :9

Sequence 1:NP_001261161.1 Gene:Stoml2 / 37807 FlyBaseID:FBgn0034936 Length:366 Species:Drosophila melanogaster
Sequence 2:NP_001011965.1 Gene:Stom / 296655 RGDID:1305109 Length:284 Species:Rattus norvegicus


Alignment Length:206 Identity:64/206 - (31%)
Similarity:119/206 - (57%) Gaps:15/206 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PIN--MCVMFVPQQEAWVVERMGRFHRILD-----PGLNILVPVADKIKYVQSLKEIAIDVPKQS 95
            ||:  :|:..|.:.|..::.|:|   |||.     |||..::|..|....| .::.|:.|:|.|.
  Rat    47 PISIWICIKIVKEYERVIIFRLG---RILQGGAKGPGLFFILPCTDSFIKV-DMRTISFDIPPQE 107

  Fly    96 AITSDNVTLSIDGVLYLRIIDPYKASYGVEDPEFAITQLAQTTMRSELGKMSMDKVFRERESLNV 160
            .:|.|:||:|:|||:|.|:.:...|...:.:.:.|...|||||:|:.||..::.::..:||.:..
  Rat   108 VLTKDSVTISVDGVVYYRVQNATLAVANITNADSATRLLAQTTLRNALGTKNLSQILSDREEIAH 172

  Fly   161 SIVDSINKASEAWGIACLRYEIRDIRLPTRVHEAMQMQVEAERRKRAAILESEGVREAEINIAEG 225
            .:..:::.|::.|||...|.||:|::||.::..||..:.||.|..||.::.:||    |:|.:..
  Rat   173 HMQSTLDDATDDWGIKVERVEIKDVKLPVQLQRAMAAEAEAAREARAKVIAAEG----EMNASRA 233

  Fly   226 KRKSRILASEA 236
            .:::.::.:|:
  Rat   234 LKEASMVITES 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Stoml2NP_001261161.1 PHB 41..199 CDD:214581 52/162 (32%)
SPFH_paraslipin 80..188 CDD:259811 35/107 (33%)
Band_7_C 266..326 CDD:292817
StomNP_001011965.1 PHB 53..204 CDD:214581 50/154 (32%)
SPFH_stomatin 73..274 CDD:259801 54/177 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0330
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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