DRSC/TRiP Functional Genomics Resources

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Protein Alignment Stoml2 and sto-3

DIOPT Version :9

Sequence 1:NP_001261161.1 Gene:Stoml2 / 37807 FlyBaseID:FBgn0034936 Length:366 Species:Drosophila melanogaster
Sequence 2:NP_509941.1 Gene:sto-3 / 191966 WormBaseID:WBGene00006065 Length:267 Species:Caenorhabditis elegans


Alignment Length:274 Identity:73/274 - (26%)
Similarity:126/274 - (45%) Gaps:57/274 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PINM--CVMFVPQQEAWVVERMGRFHRILD----PGLNILVPVADKIKYVQSLKEIAIDVPKQSA 96
            |:::  ||..|.:.:..|:.|:||..:  |    ||:.:::|..|..|.| .|:.::.|||.|..
 Worm    32 PVSIFFCVKIVKEYDRMVIFRLGRLWQ--DNPRGPGIVLVLPFIDSHKTV-DLRVMSYDVPTQEM 93

  Fly    97 ITSDNVTLSIDGVLYLRIIDPYKASYGVEDPEFAITQLAQTTMRSELGKMSMDKVFRERESLNVS 161
            :|.|:||:.:|..:|.|..||..:...|.|...:..||||:::|:.||..|:.::..:|..:.|.
 Worm    94 LTRDSVTIGVDAAVYYRTSDPIASLARVNDAHMSTRQLAQSSLRNVLGTRSLAELMTDRHGIAVQ 158

  Fly   162 IVDSINKASEAWGIACLRYEIRDIRLPTRVHEAMQMQVEAERRKRAAILESEGVREAEINIAEGK 226
            :...::.|:..|||...|.||:|||||..:..||..:.||:|...|.::.::|..:|.       
 Worm   159 VKYILDSATLFWGIHVERVEIKDIRLPREMCRAMAAEAEAQRESDAKVVTAQGELDAS------- 216

  Fly   227 RKSRILASEAERQEHINKASGEAAAIIAVADARARSLLAIAKSLSHLDGQNAASLTLAEQYIGAF 291
                                                 :|..|:...|.|...|   |..:|:...
 Worm   217 -------------------------------------MAFQKAADELAGSPTA---LQLRYLQTL 241

  Fly   292 KKL-AKTNNTMILP 304
            .|: |..|:|:::|
 Worm   242 VKISAHDNHTIVVP 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Stoml2NP_001261161.1 PHB 41..199 CDD:214581 54/163 (33%)
SPFH_paraslipin 80..188 CDD:259811 37/107 (35%)
Band_7_C 266..326 CDD:292817 11/40 (28%)
sto-3NP_509941.1 PHB 37..196 CDD:214581 54/161 (34%)
SPFH_like 62..261 CDD:302763 64/242 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0330
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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