DRSC/TRiP Functional Genomics Resources

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Protein Alignment Stoml2 and Phb

DIOPT Version :9

Sequence 1:NP_001261161.1 Gene:Stoml2 / 37807 FlyBaseID:FBgn0034936 Length:366 Species:Drosophila melanogaster
Sequence 2:NP_032857.1 Gene:Phb / 18673 MGIID:97572 Length:272 Species:Mus musculus


Alignment Length:244 Identity:58/244 - (23%)
Similarity:98/244 - (40%) Gaps:66/244 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 RFHRILD----PGLNILVPVADKIKYVQSLKEIAID-------VPKQSAITSD------NVTLSI 106
            ||..:.|    .|.:.|:|      :||  |.|..|       ||   .||..      |:||.|
Mouse    41 RFRGVQDIVVGEGTHFLIP------WVQ--KPIIFDCRSRPRNVP---VITGSKDLQNVNITLRI 94

  Fly   107 DGVLYLRIIDPYKASY---GVEDPEFAITQLAQTTMRSELGKMSMDKVFRERESLNVSIVDSINK 168
               |:..:.......|   |.:..|..:..:....::|.:.:....::..:||.::..:.|.:.:
Mouse    95 ---LFRPVASQLPRIYTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTE 156

  Fly   169 ASEAWGIACLRYEIRDIRLP--------TRVHEAMQM-QVEAER----------RKRAAILESEG 214
            .:..:|:.     :.|:.|.        |...||.|: |.||||          :|:|||:.:||
Mouse   157 RAATFGLI-----LDDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEG 216

  Fly   215 VREAEINIAEGKRKSRILASEAERQEHINKASGEAAAIIAVADARARSL 263
            ..:|...||..      ||:..:....:.|.  |||..||...:|:|::
Mouse   217 DSKAAELIANS------LATAGDGLIELRKL--EAAEDIAYQLSRSRNI 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Stoml2NP_001261161.1 PHB 41..199 CDD:214581 34/168 (20%)
SPFH_paraslipin 80..188 CDD:259811 23/123 (19%)
Band_7_C 266..326 CDD:292817
PhbNP_032857.1 SPFH_prohibitin 27..221 CDD:259799 45/198 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0330
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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