DRSC/TRiP Functional Genomics Resources

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Protein Alignment Stoml2 and Phb2

DIOPT Version :9

Sequence 1:NP_001261161.1 Gene:Stoml2 / 37807 FlyBaseID:FBgn0034936 Length:366 Species:Drosophila melanogaster
Sequence 2:NP_001013053.1 Gene:Phb2 / 114766 RGDID:620203 Length:299 Species:Rattus norvegicus


Alignment Length:246 Identity:46/246 - (18%)
Similarity:99/246 - (40%) Gaps:60/246 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 ILDPGLNILVPVADKIKYVQSLKEIAIDV---PKQSAITSDNVTLSIDGVLYLRIIDPYKAS--- 121
            ||..||:..:|   ..:|     .|..|:   |::.:..:.:..|.:..: .||::....|.   
  Rat    63 ILAEGLHFRIP---WFQY-----PIIYDIRARPRKISSPTGSKDLQMVNI-SLRVLSRPNAQELP 118

  Fly   122 -----YGVEDPEFAITQLAQTTMRSELGKMSMDKVFRERESLNVSIVDSINKASEAWGIACLRYE 181
                 .|::..|..:..:....::|.:.|.:..::..:|..:::.|...:.:.::.:.:......
  Rat   119 SMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLILDDVA 183

  Fly   182 IRDI---RLPTRVHEAMQM-QVEAERRKRAAILESEGVREAEINIAEGKRKSRILASEAERQEHI 242
            |.::   |..|...||.|: |.||:|              |:..:.:.|:         |:::.|
  Rat   184 ITELSFSREYTAAVEAKQVAQQEAQR--------------AQFLVEKAKQ---------EQRQKI 225

  Fly   243 NKASGEAAAIIAVADA-----------RARSLLAIAKSLSHLDGQNAASLT 282
            .:|.|||.|...:.:|           :.|:...|:|:::  ..||...||
  Rat   226 VQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIA--TSQNRIYLT 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Stoml2NP_001261161.1 PHB 41..199 CDD:214581 25/150 (17%)
SPFH_paraslipin 80..188 CDD:259811 16/121 (13%)
Band_7_C 266..326 CDD:292817 6/17 (35%)
Phb2NP_001013053.1 Necessary for transcriptional repression. /evidence=ECO:0000250|UniProtKB:Q99623 19..49
PHB 39..201 CDD:214581 24/146 (16%)
SPFH_prohibitin 40..235 CDD:259799 37/203 (18%)
Necessary for transcriptional repression. /evidence=ECO:0000250|UniProtKB:Q99623 150..174 2/23 (9%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0330
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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