DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Galphas and gna14a

DIOPT Version :9

Sequence 1:NP_001163283.1 Gene:Galphas / 37805 FlyBaseID:FBgn0001123 Length:385 Species:Drosophila melanogaster
Sequence 2:XP_683989.2 Gene:gna14a / 556160 ZFINID:ZDB-GENE-081105-76 Length:354 Species:Danio rerio


Alignment Length:371 Identity:155/371 - (41%)
Similarity:212/371 - (57%) Gaps:24/371 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SEDSKSQKRRSDAISRQLQKDKQLYRATHRLLLLGAGESGKSTIVKQMRILHVDGFSDSEKKQKI 80
            |.:.|.::|.:..|.:||:|||:..|...:|||||.|||||||.:|||||:|..|::|.:||..|
Zfish     7 SAEEKERQRINQEIDKQLRKDKKDSRRELKLLLLGTGESGKSTFIKQMRIIHGSGYTDDDKKGFI 71

  Fly    81 DDIKKNIRDAILTITGAMSTLNPPVALEKKENEPRVEYIQDYASSPDFNYPPEFYEHTEELWKDK 145
            ..:.:|...|:.::..||..|.  :|....||:.....:.|.......:......:....||.|.
Zfish    72 KLVHQNTLSAMQSMVRAMDMLK--IAYANSENQAHSALVNDIEVDKIMSLDETQVKALSSLWSDS 134

  Fly   146 GVLQTYERSNEYQLIDCAKYFLDRVSTIKNPNYTPNEQDILRCRVLTSGIFETRFQVDKVNFHMF 210
            |:.:.|:|..||||.|.|||:|..:..|.|..|.|.||||||.||.|:||.|..|.:|.|.|.|.
Zfish   135 GIQECYDRRREYQLTDSAKYYLSDLDRIANAAYVPTEQDILRVRVPTTGIIEYPFDLDNVIFRMV 199

  Fly   211 DVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMVLREDPTQNRLRESLDLFKSIWNNRWLRTISI 275
            ||||||.||||||.||.:||:|||:.|.|.|:.||.|...:||:.||..|||:|....|.::.|:
Zfish   200 DVGGQRSERRKWIHCFENVTSIIFLVALSEYDQVLAECDNENRMEESKALFKTIITYPWFQSSSV 264

  Fly   276 ILFLNKQDLLAEKIKAGKSKLSEYFSEFNKYQTPIDTGDAIMESNDDPEVIRAKYFIRDEFLRIS 340
            ||||||.|:|.|||.  .|.::.||.||        ||     ..:||:.  |:.||    |::.
Zfish   265 ILFLNKTDILKEKIV--YSHVATYFPEF--------TG-----PKNDPKA--AQEFI----LKMY 308

  Fly   341 TASGDGK-HYCYPHFTCAVDTENIKRVFNDCRDIIQRMHLRQYELL 385
            ....:.| ...|.|||||.|||||:.:|...:|.|.|.:|:::.|:
Zfish   309 QEENEDKDKTIYSHFTCATDTENIRLIFAAVKDTILRHNLKEFNLV 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphasNP_001163283.1 G-alpha 44..379 CDD:206639 143/335 (43%)
gna14aXP_683989.2 G_alpha 15..352 CDD:214595 152/359 (42%)
G-alpha 35..348 CDD:206639 143/335 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.