DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Galphas and gnao1b

DIOPT Version :9

Sequence 1:NP_001163283.1 Gene:Galphas / 37805 FlyBaseID:FBgn0001123 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_957122.1 Gene:gnao1b / 393801 ZFINID:ZDB-GENE-040426-1693 Length:354 Species:Danio rerio


Alignment Length:382 Identity:162/382 - (42%)
Similarity:206/382 - (53%) Gaps:35/382 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGCFGSPTSKQSDVNSEDSKSQKRRSDAISRQLQKDKQLYRATHRLLLLGAGESGKSTIVKQMRI 65
            |||          ..|.:.::...||.||.:.|::|........:|||||.||||||||||||:|
Zfish     1 MGC----------TLSAEERAALDRSRAIEKNLKEDGISAAKDVKLLLLGGGESGKSTIVKQMKI 55

  Fly    66 LHVDGFSDSEKKQKIDDIKKNIRDAILTITGAMSTLNPPVALEKKENEPRVEYIQDYASSPDFN- 129
            :|.||||..:.||....:..|...::..|..||.||.  :....|:.....:.:.|.....:.. 
Zfish    56 IHEDGFSGDDVKQFKPVVYSNTIQSLSAILRAMETLG--IEYSDKDRLADAKMVFDVVGRMEDTE 118

  Fly   130 -YPPEFYEHTEELWKDKGVLQTYERSNEYQLIDCAKYFLDRVSTIKNPNYTPNEQDILRCRVLTS 193
             |..|.......||.|.|....:.||.||||.|.|:|:||.:..|.:|:|.|.||||||.||.|:
Zfish   119 PYSTELLAAMIRLWTDTGTQACFNRSREYQLNDSAQYYLDSLQRIGSPDYLPTEQDILRTRVKTT 183

  Fly   194 GIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMVLREDPTQNRLRESL 258
            ||.||.|....:||.:|||||||.||:|||.||.|||||||..|.|.|:.:|.||.|.||:.|||
Zfish   184 GIVETHFSFKNLNFRLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSGYDQMLHEDETTNRMHESL 248

  Fly   259 DLFKSIWNNRWLRTISIILFLNKQDLLAEKIKAGKSKLSEYFSEFNKYQTPIDTGDAIMESNDDP 323
            .||.||.||::....||||||||:||..|||.  ||.||..|.|:        ||....|:    
Zfish   249 MLFDSICNNKFFVDTSIILFLNKKDLFGEKIV--KSPLSICFPEY--------TGPNTFEA---- 299

  Fly   324 EVIRAKYFIRDEFLRISTASGDGKHYCYPHFTCAVDTENIKRVFNDCRDIIQRMHLR 380
                |..:|:.:| .....|.:.:.||  |.|||.||.||:.||:...|||...:||
Zfish   300 ----AASYIQGQF-ETKNRSPNKEIYC--HLTCATDTGNIQVVFDAVTDIIIANNLR 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphasNP_001163283.1 G-alpha 44..379 CDD:206639 150/336 (45%)
gnao1bNP_957122.1 G_alpha 14..352 CDD:214595 158/359 (44%)
G-alpha 43..348 CDD:206639 144/327 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.