DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphas and Gnat2

DIOPT Version :9

Sequence 1:NP_001163283.1 Gene:Galphas / 37805 FlyBaseID:FBgn0001123 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_001102420.2 Gene:Gnat2 / 365901 RGDID:1309514 Length:354 Species:Rattus norvegicus


Alignment Length:379 Identity:167/379 - (44%)
Similarity:225/379 - (59%) Gaps:42/379 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SDVNSEDSKSQKRRSDAISRQLQKDKQLYRATHRLLLLGAGESGKSTIVKQMRILHVDGFSDSEK 76
            |.:::|| |...:||..:.::||:|......|.:||||||||||||||||||:|:|.||:|..|.
  Rat     3 SGISAED-KELAKRSRELEKKLQEDADKEAKTVKLLLLGAGESGKSTIVKQMKIIHQDGYSPEEC 66

  Fly    77 KQKIDDIKKNIRDAILTITGAMSTLNPPVALEKKENEP-------RVEYIQDYASSPDFNYPPEF 134
            .:....|..|:..:||.|..|||||....|      ||       ::..:.|  |:.:...|.|.
  Rat    67 LEFKSVIYGNVLQSILAIIRAMSTLGIDYA------EPSCAEAGRQLNNLAD--STEEGTMPSEL 123

  Fly   135 YEHTEELWKDKGVLQTYERSNEYQLIDCAKYFLDRVSTIKNPNYTPNEQDILRCRVLTSGIFETR 199
            .|...:||||.||...::|:.|:||.|.|.|:|:::..|.:|:|.|||||:||.||.|:||.||:
  Rat   124 VEVIRKLWKDGGVQACFDRAAEFQLNDSASYYLNQLDRITDPDYLPNEQDVLRSRVKTTGIIETK 188

  Fly   200 FQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMVLREDPTQNRLRESLDLFKSI 264
            |.|..:||.||||||||.||:|||.||..||.|||..|.|:|:|||.||...||:.|||.||.||
  Rat   189 FSVKDLNFRMFDVGGQRSERKKWIHCFEGVTCIIFCAALSAYDMVLVEDDEVNRMHESLHLFNSI 253

  Fly   265 WNNRWLRTISIILFLNKQDLLAEKIKAGKSKLSEYFSEF---NKYQTPIDTGDAIMESNDDPEVI 326
            .|:::....||:|||||:||..||||  |..||..|.|:   |.|:   |.|:            
  Rat   254 CNHKFFAATSIVLFLNKKDLFEEKIK--KVHLSICFPEYDGNNSYE---DAGN------------ 301

  Fly   327 RAKYFIRDEFLRISTASGDGKHYCYPHFTCAVDTENIKRVFNDCRDIIQRMHLR 380
                :|:.:||.::... |.|. .|.|.|||.||:|:|.||:...|||.:.:|:
  Rat   302 ----YIKSQFLDLNMRK-DVKE-IYSHMTCATDTQNVKFVFDAVTDIIIKENLK 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphasNP_001163283.1 G-alpha 44..379 CDD:206639 156/344 (45%)
Gnat2NP_001102420.2 G-alpha 34..348 CDD:206639 156/344 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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