DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphas and Gnat1

DIOPT Version :9

Sequence 1:NP_001163283.1 Gene:Galphas / 37805 FlyBaseID:FBgn0001123 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_001102250.2 Gene:Gnat1 / 363143 RGDID:1304683 Length:350 Species:Rattus norvegicus


Alignment Length:363 Identity:154/363 - (42%)
Similarity:222/363 - (61%) Gaps:23/363 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SKSQKRRSDAISRQLQKDKQLYRATHRLLLLGAGESGKSTIVKQMRILHVDGFSDSEKKQKIDDI 83
            :.::::.|..:.::|::|.:....|.:||||||||||||||||||:|:|.||:|..|..:.|..|
  Rat     5 ASAEEKHSRELEKKLKEDAEKDARTVKLLLLGAGESGKSTIVKQMKIIHQDGYSLEECLEFIAII 69

  Fly    84 KKNIRDAILTITGAMSTLNPPVALEKKENEPR-VEYIQDYASSPDFNYPPEFYEHTEELWKDKGV 147
            ..|...:||.|..||:|||.......::::.| :.::.|  :..:...|.|..:..:.||||.|:
  Rat    70 YGNTLQSILAIVRAMTTLNIQYGDSARQDDARKLMHMAD--TIEEGTMPKEMSDIIQRLWKDSGI 132

  Fly   148 LQTYERSNEYQLIDCAKYFLDRVSTIKNPNYTPNEQDILRCRVLTSGIFETRFQVDKVNFHMFDV 212
            ...::|::||||.|.|.|:|..:..:..|.|.|.|||:||.||.|:||.||:|....:||.||||
  Rat   133 QACFDRASEYQLNDSAGYYLSDLERLVTPGYVPTEQDVLRSRVKTTGIIETQFSFKDLNFRMFDV 197

  Fly   213 GGQRDERRKWIQCFNDVTAIIFVTACSSYNMVLREDPTQNRLRESLDLFKSIWNNRWLRTISIIL 277
            ||||.||:|||.||..||.|||:.|.|:|:|||.||...||:.|||.||.||.|:|:..|.||:|
  Rat   198 GGQRSERKKWIHCFEGVTCIIFIAALSAYDMVLVEDDEVNRMHESLHLFNSICNHRYFATTSIVL 262

  Fly   278 FLNKQDLLAEKIKAGKSKLSEYFSEFNKYQTPIDTGDAIMESNDDPEVIRAKYFIRDEFLRISTA 342
            ||||:|:.:||||  |:.||..|.:::...|..|.|:                :|:.:||.::..
  Rat   263 FLNKKDVFSEKIK--KAHLSICFPDYDGPNTYDDAGN----------------YIKVQFLELNMR 309

  Fly   343 SGDGKHYCYPHFTCAVDTENIKRVFNDCRDIIQRMHLR 380
            . |.|. .|.|.|||.||:|:|.||:...|||.:.:|:
  Rat   310 R-DVKE-IYSHMTCATDTQNVKFVFDAVTDIIIKENLK 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphasNP_001163283.1 G-alpha 44..379 CDD:206639 149/335 (44%)
Gnat1NP_001102250.2 G-alpha 30..344 CDD:206639 149/335 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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