DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphas and gna13b

DIOPT Version :9

Sequence 1:NP_001163283.1 Gene:Galphas / 37805 FlyBaseID:FBgn0001123 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_001013281.2 Gene:gna13b / 336333 ZFINID:ZDB-GENE-030131-8277 Length:377 Species:Danio rerio


Alignment Length:404 Identity:145/404 - (35%)
Similarity:206/404 - (50%) Gaps:67/404 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CFGSPTSKQSDVNSEDSKSQKRRSDAISRQLQKDKQLYRATHRLLLLGAGESGKSTIVKQMRILH 67
            ||         ::|.|:: |.|:|..|.|::.|:|...:...::||||||||||||.:|||||:|
Zfish    18 CF---------LDSSDAE-QLRKSKEIDREIFKEKTFVKRLVKILLLGAGESGKSTFLKQMRIIH 72

  Fly    68 VDGFSDSEKKQKIDDIKKNIRDAILTITGAMSTLNPPVALEKKENEPRVEYIQDYASSP------ 126
            .|.|...:|::....|..|:...:..:..|...|:.|......:....:....|..|:.      
Zfish    73 GDDFDKGDKEEFRGTIYSNVMKGVRVLVDAREKLHIPWGNPSNQTHADIMMAFDTRSTMVSQGML 137

  Fly   127 DFNYPPEFYEHTEELWKDKGVLQTYERSNEYQLIDCAKYFLDRVSTIKNPNYTPNEQDILRCRVL 191
            :....|::......||.|.|:...|:|..|:||.:..|||||.:..:..|:|.|.:||||..|..
Zfish   138 ETKLFPQYLPSIRALWADIGIQHAYDRRREFQLGESVKYFLDNLDKLGAPDYLPTQQDILLARKP 202

  Fly   192 TSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMVLREDPTQNRLRE 256
            |.||.|..|::..|.|.|.||||||.|||:|.:||..||:|:|:.:.|.|:.||.||...|||.|
Zfish   203 TKGIHEYDFEIKNVPFKMVDVGGQRSERRRWFECFESVTSILFLVSSSEYDQVLMEDRQTNRLME 267

  Fly   257 SLDLFKSIWNNRWLRTISIILFLNKQDLLAEKIKAGKSKLSEYFSEFNKYQTPIDTGDAIMESND 321
            ||::|::|.|||....:||||||||.|||.||:|:  ..:.:||.||                .|
Zfish   268 SLNIFETIVNNRVFNNVSIILFLNKTDLLEEKVKS--VSIQDYFPEF----------------TD 314

  Fly   322 DPEVIRAKYFIRDEFLRISTASGDGKHY---C-------------YPHFTCAVDTENIKRVFNDC 370
            ||..:                 ||.|::   |             |.|||.|::||||:.||.|.
Zfish   315 DPWCL-----------------GDVKNFLVECFRNKRRDQQQKPLYHHFTTAINTENIRLVFRDV 362

  Fly   371 RDIIQRMHLRQYEL 384
            :|.|...:|:|..|
Zfish   363 KDTILHDNLKQLML 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphasNP_001163283.1 G-alpha 44..379 CDD:206639 131/356 (37%)
gna13bNP_001013281.2 G_alpha 29..375 CDD:214595 139/380 (37%)
G-alpha 49..371 CDD:206639 131/356 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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