DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphas and Gnat3

DIOPT Version :9

Sequence 1:NP_001163283.1 Gene:Galphas / 37805 FlyBaseID:FBgn0001123 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_775162.1 Gene:Gnat3 / 286924 RGDID:727817 Length:354 Species:Rattus norvegicus


Alignment Length:371 Identity:156/371 - (42%)
Similarity:219/371 - (59%) Gaps:33/371 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SEDSKSQKRRSDAISRQLQKDKQLYRATHRLLLLGAGESGKSTIVKQMRILHVDGFSDSEKKQKI 80
            |.:||...:||..:.::||:|.:....|.:||||||||||||||||||:|:|.:|:|..|..:..
  Rat     6 SSESKESAKRSKELEKKLQEDAERDARTVKLLLLGAGESGKSTIVKQMKIIHKNGYSKQECMEFK 70

  Fly    81 DDIKKNIRDAILTITGAMSTL-----NPPVALEKKENEPRVEYIQDYASS-PDFNYPPEFYEHTE 139
            ..:..|...:||.|..||:||     ||    ..:|::   :.:...|:: .|.:..|:..|..:
  Rat    71 AVVYSNTLQSILAIVKAMTTLGIDYVNP----RSREDQ---QLLLSMANTLEDGDMTPQLAEIIK 128

  Fly   140 ELWKDKGVLQTYERSNEYQLIDCAKYFLDRVSTIKNPNYTPNEQDILRCRVLTSGIFETRFQVDK 204
            .||.|.|:...:||::||||.|.|.|:|:.:..:..|.|.|||||:|..||.|:||.||:|....
  Rat   129 RLWGDPGIQACFERASEYQLNDSAAYYLNDLDRLTAPGYVPNEQDVLHSRVKTTGIIETQFSFKD 193

  Fly   205 VNFHMFDVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMVLREDPTQNRLRESLDLFKSIWNNRW 269
            :||.||||||||.||:|||.||..||.|||..|.|:|:|||.||...||:.|||.||.||.|:::
  Rat   194 LNFRMFDVGGQRSERKKWIHCFEGVTCIIFCAALSAYDMVLVEDEEVNRMHESLHLFNSICNHKY 258

  Fly   270 LRTISIILFLNKQDLLAEKIKAGKSKLSEYFSEFNKYQTPIDTGDAIMESNDDPEVIRAKYFIRD 334
            ..|.||:|||||:||..||:.  |..||..|.|:....|..|.|:                :|::
  Rat   259 FATTSIVLFLNKKDLFQEKVT--KVHLSICFPEYTGPNTFEDAGN----------------YIKN 305

  Fly   335 EFLRISTASGDGKHYCYPHFTCAVDTENIKRVFNDCRDIIQRMHLR 380
            :||.::....|.:  .|.|.|||.||:|:|.||:...|||.:.:|:
  Rat   306 QFLDLNLKKEDKE--IYSHMTCATDTQNVKFVFDAVTDIIIKENLK 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphasNP_001163283.1 G-alpha 44..379 CDD:206639 146/340 (43%)
Gnat3NP_775162.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 7/20 (35%)
G-alpha 34..348 CDD:206639 146/340 (43%)
G1 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 35..48 11/12 (92%)
G2 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 173..181 4/7 (57%)
G3 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 196..205 7/8 (88%)
G4 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 265..272 5/6 (83%)
G5 motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01230 324..329 3/4 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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