DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Galphas and gpa2

DIOPT Version :9

Sequence 1:NP_001163283.1 Gene:Galphas / 37805 FlyBaseID:FBgn0001123 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_593803.1 Gene:gpa2 / 2541720 PomBaseID:SPAC23H3.13c Length:354 Species:Schizosaccharomyces pombe


Alignment Length:378 Identity:136/378 - (35%)
Similarity:198/378 - (52%) Gaps:47/378 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SEDSKSQKRRSDAISRQLQ----KDKQLYRATHRLLLLGAGESGKSTIVKQMRILHVDGFSDSEK 76
            ||..:|:|..| .|.:|::    |||::|    ::|||||.:||||||.||::||:.:|||..|.
pombe     8 SESGESKKLNS-KIEKQIENASKKDKKIY----KVLLLGASDSGKSTISKQIKILNKNGFSQEEI 67

  Fly    77 KQKIDDIKKNIRDAILTITGAMSTLNPPVALEKKEN-EP----RVEYIQDYASSPDFNYPPEFYE 136
            ...|..|::|:.::..|:.        .:.::|..| :|    ..|.|:.:..:|.........:
pombe    68 MTFIPVIRRNLLESAKTLV--------KIIVQKGINLDPLGTHNCEIIEKFNPTPGELINANIGQ 124

  Fly   137 HTEELWKDKGVLQ-TYERSNEYQLIDCAKYFLDRVSTIKNPNYTPNEQDILRCRVLTSGIFETRF 200
            ....||....|.. ||  .|:..|||.|.||..|...|.:.:|.|...||||.|..|.||.|..|
pombe   125 AITSLWSANSVRSCTY--GNDSVLIDSAPYFFSRADEICSRHYVPTIDDILRSRNSTLGISEISF 187

  Fly   201 QVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMVL--REDPTQNRLRESLDLFKS 263
            .:|.:...||||||||.||||||.||.:|.:|||..:.:.|:..|  |..|.:|||.||:.||.|
pombe   188 TLDHLQIRMFDVGGQRTERRKWIYCFENVNSIIFCVSLNDYDKKLYERAAPERNRLVESISLFDS 252

  Fly   264 IWNNRWLRTISIILFLNKQDLLAEKIKAGKSKLSEYFSEFNKYQTPIDTGDAIMESNDDPEVIRA 328
            |.|::|....||||||||.||..:|::  .....:||.::              |..:..:.| .
pombe   253 IINSQWFMHSSIILFLNKFDLFRKKLE--HVPFQDYFPQY--------------EGKNSVKSI-T 300

  Fly   329 KYFIRDEFLRISTASGDGKHYCYPHFTCAVDTENIKRVFNDCRDIIQRMHLRQ 381
            :|.:   :|.::.:....||..|||.|.||||.|||.||:..::.|.:..|::
pombe   301 RYIL---WLFVNPSINRAKHNIYPHITTAVDTSNIKVVFSAVKETILQHSLKE 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphasNP_001163283.1 G-alpha 44..379 CDD:206639 124/342 (36%)
gpa2NP_593803.1 G_alpha 14..352 CDD:214595 133/372 (36%)
G-alpha 35..348 CDD:206639 125/346 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10218
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.