DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphas and gpa-5

DIOPT Version :9

Sequence 1:NP_001163283.1 Gene:Galphas / 37805 FlyBaseID:FBgn0001123 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_508393.1 Gene:gpa-5 / 180527 WormBaseID:WBGene00001667 Length:385 Species:Caenorhabditis elegans


Alignment Length:409 Identity:125/409 - (30%)
Similarity:190/409 - (46%) Gaps:75/409 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GSPTSKQSDVNSEDSKSQKRRSDAISRQLQKDKQLYRATHRLLLLGAGESGKSTIVKQMRILHVD 69
            |..|.||    ..:::.|.|:.|.   |::.:.|..:...::||||..:|||||||||||:.::|
 Worm     2 GLVTCKQ----EREAELQNRQIDT---QIRIENQANKRKIKMLLLGVTDSGKSTIVKQMRVNYLD 59

  Fly    70 GFSDSEKKQKIDDIKKNIRDAILTITGAMSTLNPPVALEKK-------ENEPRVEYIQDYASSPD 127
            ||:::|....|..|:.||.||...|...:...:..|..|:|       ....::|.:|:......
 Worm    60 GFNETEVVNAIFVIRNNIIDAFKNICNIILHSDITVTQEEKVLVKLFAYESGKIELMQEVDELNV 124

  Fly   128 FNYPPEFYEHTEELWKDKGVLQTYERSNEYQLI-DCAKYFLDRVSTIKNPNYTPNEQDILRCRVL 191
            .|....:          :.:.|.:||...:.:: |...||...:..|.:.||.|..:|::..|..
 Worm   125 INAVSGY----------ECIKQFFERFAFHPMVPDHIHYFYPNLDRIASSNYVPTAEDLIHMRQT 179

  Fly   192 TSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMVLREDPTQ----- 251
            |.|:.|..|...|....:.|||||:.||||||..|..|||::||.:.:|:|....|:|..     
 Worm   180 TLGVHEISFDYTKHIIRLIDVGGQKTERRKWIHFFEGVTAVMFVCSLASFNQTTEEEPKAFVWES 244

  Fly   252 -------------------------NRLRESLDLFKSIWNNRWLRTISIILFLNKQDLLAEKIKA 291
                                     |||.||:||||||..|.:|:..:.:|||||:|||.:|:. 
 Worm   245 SLNKVQNKVLVRSAGKAKVEKPGLINRLDESVDLFKSIRENSFLKMSNFMLFLNKKDLLTKKLT- 308

  Fly   292 GKSKLSEYFSEFNKYQTPIDTGDAIMESNDDPEVIRAKYFIRDEFLRISTASG-DGKHYCYPHFT 355
             |...|:||.::.|:.|           ||:.:|..|      ||:......| :.:...|.|.|
 Worm   309 -KVVFSDYFPDYKKWIT-----------NDNSDVSVA------EFIENMFREGLEPEKRMYAHLT 355

  Fly   356 CAVDTENIKRVFNDCRDII 374
            .|..|.||:..|..|.|:|
 Worm   356 QATVTANIEGTFALCCDVI 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphasNP_001163283.1 G-alpha 44..379 CDD:206639 116/370 (31%)
gpa-5NP_508393.1 G_alpha 13..383 CDD:214595 121/394 (31%)
G-alpha 34..379 CDD:206639 116/370 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162160
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.750

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