DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Galphas and gpa-8

DIOPT Version :9

Sequence 1:NP_001163283.1 Gene:Galphas / 37805 FlyBaseID:FBgn0001123 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_506160.1 Gene:gpa-8 / 179731 WormBaseID:WBGene00001670 Length:364 Species:Caenorhabditis elegans


Alignment Length:380 Identity:128/380 - (33%)
Similarity:203/380 - (53%) Gaps:33/380 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGCFGSPTSKQSDVNSEDSKSQKRRSDAISRQLQKDKQLYRATHRLLLLGAGESGKSTIVKQMRI 65
            ||...|  |:...::.|:.|.|...:.:|...|:||:::  ...:||:||.|||||||.:||::|
 Worm     1 MGALCS--SETYMLDKEEYKKQVEHNKSIENDLEKDRKI--KILKLLILGPGESGKSTTIKQIKI 61

  Fly    66 LHVDGFSDSEKKQKIDDIKKNIRDAI----LTITGAMSTLNPPVALEKKENEPRVEYIQDYASSP 126
            :|.:|:|..||..:...|..||.:.|    |::.....:...|::.: ..||.|: :.:::..:.
 Worm    62 IHDEGYSAEEKMVRKHGIYMNILEGIEEIHLSVGRENKSYKNPLSFD-HINEVRM-FTENFKKAD 124

  Fly   127 DFN--YPPEFYEHTEELWKDKGVLQTYERSNEYQLIDCAKYFLDRVSTIKNPNYTPNEQDILRCR 189
            |..  ..||.....::..||:.:.........|.:.|...|||:..|.|...:|.|.|:|||:.|
 Worm   125 DSEKLLGPEVINAIQKYIKDETIAMMLRDKTVYNIDDSTIYFLENFSRIIQKDYLPTEEDILKSR 189

  Fly   190 VLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMVLREDPTQNRL 254
            |.|||:.:.:..:...||.:|||||||.:||||:..|:||.|::|:|:.|.|:.|||||.|.||:
 Worm   190 VPTSGVIQYKIMLKNFNFRIFDVGGQRAQRRKWLHVFDDVQAVLFITSLSEYDQVLREDATVNRM 254

  Fly   255 RESLDLFKSIWNNRWLRTISIILFLNKQDLLAEKIKAGKSKLSEYFSEFNKYQTPIDTGDAIMES 319
            :|||:||:.|.|.|:....::||||||.||...|||.....::     ...|:.|.:...|:   
 Worm   255 KESLNLFEKICNGRYFLNTAMILFLNKIDLFKIKIKHTNITVA-----LTSYKGPQECDSAL--- 311

  Fly   320 NDDPEVIRAKYFIRDEFLRISTASGDGKHYCYPHFTCAVDTENIKRVFNDCRDII 374
                      .:||..|:.::.   :.|...|.|.|||.|||.|:.|.:...|::
 Worm   312 ----------DYIRKRFISLNK---NKKRSIYEHVTCATDTEQIQVVIDSVIDVV 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphasNP_001163283.1 G-alpha 44..379 CDD:206639 117/337 (35%)
gpa-8NP_506160.1 G_alpha 22..343 CDD:214595 118/345 (34%)
G-alpha 46..343 CDD:206639 111/319 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162140
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

Return to query results.
Submit another query.