DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphas and gpa-1

DIOPT Version :9

Sequence 1:NP_001163283.1 Gene:Galphas / 37805 FlyBaseID:FBgn0001123 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_505840.1 Gene:gpa-1 / 179546 WormBaseID:WBGene00001663 Length:357 Species:Caenorhabditis elegans


Alignment Length:374 Identity:134/374 - (35%)
Similarity:189/374 - (50%) Gaps:36/374 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SEDSKSQKRRSDAISRQLQKDKQLYRATHRLLLLGAGESGKSTIVKQMRILHVDGFSDSEKKQKI 80
            |.:..:|.:::..|:.:|.|.|:......:|||||||||||||::|||:|:|..|||..|...|.
 Worm     6 SRELVAQAKQNKIINTELDKAKKTDENIIKLLLLGAGESGKSTVLKQMKIIHNSGFSQEEISNKR 70

  Fly    81 DDIKKNIRDAILTITGAMSTL---------NPPVALEKKENEPRVEYIQDYASSPDFNYPPEFYE 136
            :.:..|...|:..:...|..|         |....|.::....:.||      .|   :....:.
 Worm    71 NVVCANTVQAMGALLDGMKQLQFDFSTRVCNAHEKLIRETLNDKAEY------GP---FSDAMFN 126

  Fly   137 HTEELWKDKGVLQTYERSNEYQLIDCAKYFLDRVSTIKNPNYTPNEQDILRCRVLTSGIFETRFQ 201
            ...|||.||||...|::...:.|.|.||||.|.::.:..|||.|.|.|||..||.|.|:.|..|.
 Worm   127 ALTELWADKGVQCAYDKREFFYLHDSAKYFFDAIARVHTPNYVPTENDILHTRVPTMGVIEVNFT 191

  Fly   202 VDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMVLREDPTQNRLRESLDLFKSIWN 266
            :....|.:|||||||.:|:|||.||:|..|:|:|.:.|.|:.||.||.|.||:.||:.|||.:.|
 Worm   192 IKGKFFRVFDVGGQRSQRKKWIHCFDDAKAMIYVASLSEYDQVLLEDNTTNRMHESIQLFKQVIN 256

  Fly   267 NRWLRTISIILFLNKQDLLAEKIKAGKSKLSEYFSEFNKYQTPIDTGDAIMESNDDPEVIRAKYF 331
            |::....|:||||||.||..|||...|..|...|..|:.....::...|.:|.         || 
 Worm   257 NKYFVNTSVILFLNKIDLFEEKIVTKKRSLGIAFESFSGPSQDLNAAVAFVEK---------KY- 311

  Fly   332 IRDEFLRISTASGDGKHYCYPHFTCAVDTENIKRVFNDCRDIIQRMHLR 380
                  |....:.:...||  |.|||.||:.::.|.:...|.|....|:
 Worm   312 ------RSMAENKEKNIYC--HHTCATDTQQVQYVLDAVLDTILSTKLK 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphasNP_001163283.1 G-alpha 44..379 CDD:206639 127/343 (37%)
gpa-1NP_505840.1 G_alpha 13..355 CDD:214595 132/367 (36%)
G-alpha 34..348 CDD:206639 127/340 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162132
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.850

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