DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphas and gpa-3

DIOPT Version :9

Sequence 1:NP_001163283.1 Gene:Galphas / 37805 FlyBaseID:FBgn0001123 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_001309498.1 Gene:gpa-3 / 179319 WormBaseID:WBGene00001665 Length:353 Species:Caenorhabditis elegans


Alignment Length:375 Identity:140/375 - (37%)
Similarity:201/375 - (53%) Gaps:41/375 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SEDSKSQKRRSDAISRQLQKDKQLYRATHRLLLLGAGESGKSTIVKQMRILHVDGFSDSEKKQKI 80
            |.:.|....:|.||.:::.::....:...:||||||||.||||::|||||||..||:..|.:|:.
 Worm     6 SAEDKELTLKSKAIDKEMMQNHMSQQKVVKLLLLGAGECGKSTVLKQMRILHDHGFTAEEAEQQK 70

  Fly    81 DDIKKNIRDAILTITGAMSTLNPPVALEKKENEPRV-----EYIQDYASSPDFNYPPEFYEHTEE 140
            ..:..|...|:..|...|..|........:||:.:.     :.:|:...     :|.|.....:.
 Worm    71 SVVFNNTLQAMTAILKGMEALRMTFDKPIRENDAKFVMESHKMLQEAKV-----FPEELANAIQA 130

  Fly   141 LWKDKGVLQTYERSNEYQLIDCAKYFLDRVSTIKNPNYTPNEQDILRCRVLTSGIFETRFQVDKV 205
            ||.||.|.|...:.||:|:.:.|.:||..:..||.|:|.|.|||||..|:.|:||.|.:||:..|
 Worm   131 LWNDKAVQQVIAKGNEFQMPESAPHFLSSLDRIKLPDYNPTEQDILLSRIKTTGIVEVKFQMKSV 195

  Fly   206 NFHMFDVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMVLREDPTQNRLRESLDLFKSIWNNRWL 270
            :|.:|||||||.||:|||.||.||.||||:.|.|.|:.||.||.|.||:.||:.||:||.|:||.
 Worm   196 DFRVFDVGGQRSERKKWIHCFEDVNAIIFIAAISEYDQVLFEDETTNRMIESMRLFESICNSRWF 260

  Fly   271 RTISIILFLNKQDLLAEKIKAGKSKLSEYFSEFNKYQTPIDTGDAIMESNDDPEVIRAKYFIRDE 335
            ...|:||||||:||.|||||  ::.:...|.::...||                        .||
 Worm   261 INTSMILFLNKKDLFAEKIK--RTSIKSAFPDYKGAQT------------------------YDE 299

  Fly   336 FLRISTASGDG-----KHYCYPHFTCAVDTENIKRVFNDCRDIIQRMHLR 380
            ..|......||     :...|.|.|||.||:.::.:.:...|:|.:.:|:
 Worm   300 SCRYIEEKFDGLNANPEKTIYMHQTCATDTDQVQMILDSVIDMIIQANLQ 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphasNP_001163283.1 G-alpha 44..379 CDD:206639 134/344 (39%)
gpa-3NP_001309498.1 G-alpha 34..348 CDD:206639 134/344 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162157
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.750

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