DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphas and gpa-2

DIOPT Version :9

Sequence 1:NP_001163283.1 Gene:Galphas / 37805 FlyBaseID:FBgn0001123 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_505157.1 Gene:gpa-2 / 179219 WormBaseID:WBGene00001664 Length:356 Species:Caenorhabditis elegans


Alignment Length:371 Identity:135/371 - (36%)
Similarity:196/371 - (52%) Gaps:29/371 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SEDSKSQKRRSDAISRQLQKDKQLYRATHRLLLLGAGESGKSTIVKQMRILHVDGFSDSEKKQKI 80
            ||:.|....:|.||.:::::.:.....|.:||||||||.||||::||||:|....::|.|...:.
 Worm     6 SEEEKVGTLKSRAIDKEIKQLQTSEERTVKLLLLGAGECGKSTVLKQMRLLTSKQYTDEELLTQA 70

  Fly    81 DDIKKNIRDAILTITGAM--STLNPPVALEKKENEPRVEYIQDYASSPDFNYPPEFYEHTEELWK 143
            ..:..||...:..:..||  :.||....:.:.:......||:|....   |:..:..:|.|:|||
 Worm    71 KLVYTNIVIEMDHLVKAMPAAGLNFSDPMREHDVHMLTLYIKDMQHK---NFQQDAADHVEKLWK 132

  Fly   144 DKGVLQTYERSNEYQLIDC---AKYFLDRVSTIKNPNYTPNEQDILRCRVLTSGIFETRFQVDKV 205
            |..|.:.|....|..:.|.   .:||.:.:..|...:|.||..|.|..|..|:||.|..|::.||
 Worm   133 DPVVKRLYAERKELNIRDIGDNTEYFFENLPRISKEDYHPNATDTLLLRTKTTGIVEVGFEIKKV 197

  Fly   206 NFHMFDVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMVLREDPTQNRLRESLDLFKSIWNNRWL 270
            .|.:|||||||.||:|||.||.||.||||:.|.|.||.||.||.|.||:.||:.||:||.|:||.
 Worm   198 KFRVFDVGGQRSERKKWIHCFEDVNAIIFIAALSEYNEVLFEDETTNRMIESMRLFESICNSRWF 262

  Fly   271 RTISIILFLNKQDLLAEKIKAGKSKLSEYFSEFNKYQTPIDTGDAIMESNDDPEVIRAKYFIRDE 335
            ...:|||||||:||..||||  |..:.:.|.|:...|...:|                ..||:.:
 Worm   263 HNTNIILFLNKKDLFEEKIK--KENIHKAFPEYRGEQNYAET----------------VAFIKTK 309

  Fly   336 FLRISTASGDGKHYCYPHFTCAVDTENIKRVFNDCRDIIQRMHLRQ 381
            |   ...|.:.|...|.|.|||.||..::::.:....:|.:.:|.:
 Worm   310 F---EALSNNPKKTFYVHETCATDTNQVQKILDSVISMIIQSNLHK 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphasNP_001163283.1 G-alpha 44..379 CDD:206639 127/339 (37%)
gpa-2NP_505157.1 G_alpha 13..354 CDD:214595 132/364 (36%)
G-alpha 34..350 CDD:206639 127/339 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162158
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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