DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphas and gpa-10

DIOPT Version :9

Sequence 1:NP_001163283.1 Gene:Galphas / 37805 FlyBaseID:FBgn0001123 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_504745.1 Gene:gpa-10 / 179075 WormBaseID:WBGene00001672 Length:356 Species:Caenorhabditis elegans


Alignment Length:394 Identity:114/394 - (28%)
Similarity:188/394 - (47%) Gaps:71/394 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 QSDVNSEDSKSQKRRSDAISRQLQKDKQLYRATHRLLLLGAGESGKSTIVKQMRILHVDGFSDSE 75
            ||.|.:::.|.|.:.:..|.:||:|.|.: :....:||||.|||||||::||||.: ...::.:|
 Worm     5 QSFVLTDEMKDQIKVNKEIEKQLEKKKNM-QLEQTVLLLGPGESGKSTVMKQMRAM-TGNYTKTE 67

  Fly    76 KKQKIDDIKKNIRDAILTITGAMSTLNPPVALEKKENEPRVEYIQDY----ASSPDFNYP----- 131
            ..::...|.:|:                     .:.:|..:||:::|    ....|..|.     
 Worm    68 LHERKVLIIQNL---------------------CQFSEMLLEYVREYILEMTEDDDKRYTVMCEE 111

  Fly   132 ------------PEFYEHTEELWKDKGVLQTYERSNEYQLIDCAKYFLDRVSTIKNPNYTPNEQD 184
                        ||..:..:|.|.:..:...|.:.:.:.|.|.||||.|.:..||.|.:.|..||
 Worm   112 LKMAVIHDGIMRPELADTLKEFWGNSAIQDAYSKRDTFHLTDSAKYFFDNIDRIKLPGFEPTNQD 176

  Fly   185 ILRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMVLREDP 249
            |:..||.|:|:.:....::.:...:.|.||||.|||||...|::..|::||.|.|.::..|.||.
 Worm   177 IVHIRVPTTGVAQVEVIMNNIKLMICDCGGQRSERRKWYHFFDEADAVLFVAAISEFDQKLAEDE 241

  Fly   250 TQNRLRESLDLFKSIWNNRWLRTISIILFLNKQDLLAEKIKAGKSKLSEYFSEFNKYQTPIDTGD 314
            ..||:.||:.||.:::|.::.:..::||||||.||..||:|  ..|:.:||.:|....|      
 Worm   242 ETNRMHESIRLFWTVFNGKFFKKAAVILFLNKIDLFEEKVK--HVKIKDYFPKFEGANT------ 298

  Fly   315 AIMESNDDPEVIRAKYFIRDEFLRISTASG---DGKHYCYPHFTCAVDTENIKRVFNDCRDIIQR 376
                      |.....|.|.:|     ..|   |.|...|.|.|||: ::.::.:.|...|.:.:
 Worm   299 ----------VSEGTKFFRRQF-----REGIHPDFKKRMYTHETCAI-SDQVQIIINTVIDTVIQ 347

  Fly   377 MHLR 380
            .:|:
 Worm   348 DNLK 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphasNP_001163283.1 G-alpha 44..379 CDD:206639 103/358 (29%)
gpa-10NP_504745.1 G_alpha 17..354 CDD:214595 109/382 (29%)
G-alpha 39..350 CDD:206639 103/356 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162133
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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