DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphas and gpa-4

DIOPT Version :9

Sequence 1:NP_001163283.1 Gene:Galphas / 37805 FlyBaseID:FBgn0001123 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_499921.2 Gene:gpa-4 / 176865 WormBaseID:WBGene00001666 Length:359 Species:Caenorhabditis elegans


Alignment Length:384 Identity:151/384 - (39%)
Similarity:209/384 - (54%) Gaps:36/384 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGCFGSPTSKQSDVNSEDSKSQKRRSDAISRQLQKDKQLYRATHRLLLLGAGESGKSTIVKQMRI 65
            ||||.|..|:           .|:||..|..||:.|.:......:|||||||||||||||:||||
 Worm     1 MGCFHSTGSE-----------AKKRSKLIDEQLRHDHERCVGEIKLLLLGAGESGKSTIVRQMRI 54

  Fly    66 LHVDGFSDSEKKQKIDDIKKNIRDAILTITGAMSTLNPPVALEKKENEPRV-----EYIQDYASS 125
            ||..||:..|:......:..|:..::|.|..||..||.......:|.:.|:     .::.:...|
 Worm    55 LHETGFNKQEQMAYRPVVFSNMVQSMLAILKAMQPLNISFTDAAREEDARMFISHFLHVNNAELS 119

  Fly   126 PDFNYPPEFYEHTEELWKDKGVLQTYERSNEYQLIDCAKYFLDRVSTIKNPNYTPNEQDILRCRV 190
            ..|:.  |..:..::||.|:||.:..:|::||||.|.|:|:.:.:..|.:.:|.|.:.||||.||
 Worm   120 EAFSL--ELSDLMKQLWMDEGVKKCVKRAHEYQLNDSAEYYFNALDRISSSSYLPTQDDILRARV 182

  Fly   191 LTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMVLREDPTQNRLR 255
            .::||.||.|....:.|.||||||||.||:|||.||:.|||:||..|.|.|::.|.||.|.||:.
 Worm   183 KSTGIVETTFMYKDLCFKMFDVGGQRSERKKWIHCFDSVTAVIFCVALSEYDLRLAEDQTMNRMH 247

  Fly   256 ESLDLFKSIWNNRWLRTISIILFLNKQDLLAEKIKAGKSKLSEYFSEFNKYQTPIDTGDAIMESN 320
            ||:.||.||.||.|....||||||||.|:..|:|:  .:.|:..|.|:....|..:|..      
 Worm   248 ESMQLFDSIVNNCWFTETSIILFLNKMDIFEERIR--YTPLTVCFPEYQGGMTITETST------ 304

  Fly   321 DDPEVIRAKYFIRDEFLRISTASGDGKHYCYPHFTCAVDTENIKRVFNDCRDIIQRMHL 379
                      ||:..|..::......:...|.|||||.||.||:.||:...|||.|.:|
 Worm   305 ----------FIQSRFEILNKRQTPAQKEIYSHFTCATDTNNIRFVFDAVTDIIIRNNL 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphasNP_001163283.1 G-alpha 44..379 CDD:206639 137/339 (40%)
gpa-4NP_499921.2 G_alpha 12..357 CDD:214595 145/362 (40%)
G-alpha 33..353 CDD:206639 137/339 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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