DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphas and gpa-16

DIOPT Version :9

Sequence 1:NP_001163283.1 Gene:Galphas / 37805 FlyBaseID:FBgn0001123 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_490790.1 Gene:gpa-16 / 171675 WormBaseID:WBGene00001678 Length:357 Species:Caenorhabditis elegans


Alignment Length:384 Identity:158/384 - (41%)
Similarity:213/384 - (55%) Gaps:36/384 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGCFGSPTSKQSDVNSEDSKSQKRRSDAISRQLQKDKQLYRATHRLLLLGAGESGKSTIVKQMRI 65
            |||          :.|::.::.||||..|.|.|::|.:....|.:||||||||||||||:|||||
 Worm     1 MGC----------IMSQEDEAAKRRSKKIDRLLKEDGENSMRTIKLLLLGAGESGKSTILKQMRI 55

  Fly    66 LHVDGFSDSEKKQKIDDIKKNIRDAILTITGAMSTLNPPVALEKKENEPRVEYIQDYASSPDFNY 130
            :|..|::..|:|.....:..||..::..|..||..|.........|::.| :.:....:..:...
 Worm    56 IHDVGYTTEERKVFRGVVYGNIILSLNAIIHAMEQLKISFTTLDHESDAR-KLLMFSTTGEEDEL 119

  Fly   131 PPEFYEHTEELWKDKGVLQTYERSNEYQLIDCAKYFLDRVSTIKNPNYTPNEQDILRCRVLTSGI 195
            |.|.....:.:|.|.|:.:..|||.||||.|.|.|:|.::..|..|||.|.:.||||.|:.|:||
 Worm   120 PEELVVLMKSVWSDSGIQKALERSREYQLNDSAGYYLSQLDRICAPNYIPTQDDILRTRIKTTGI 184

  Fly   196 FETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMVLREDPTQNRLRESLDL 260
            .||:|......|.:|||||||.||:|||.||.||||:||..|.|.|:|||.||...||:||||.|
 Worm   185 VETQFVYKDRLFLVFDVGGQRSERKKWIHCFEDVTALIFCVALSEYDMVLVEDCQTNRMRESLKL 249

  Fly   261 FKSIWNNRWLRTISIILFLNKQDLLAEKIKAGKSKLSEYFSEF---NKYQTPIDTGDAIMESNDD 322
            |.||.||:|....||||||||:||..|||.  :|.|:..|.|:   |.|:               
 Worm   250 FDSICNNKWFVETSIILFLNKKDLFEEKIV--RSPLTHCFPEYTGANNYE--------------- 297

  Fly   323 PEVIRAKYFIRDEFLRIS-TASGDGKHYCYPHFTCAVDTENIKRVFNDCRDIIQRMHLR 380
                .|..:|:.:|..:: ..:|:.....|..||||.||.||:.||:...|||.|.:||
 Worm   298 ----EASAYIQQQFEDMNKRTTGEKNQEIYTQFTCATDTNNIRFVFDAVTDIIIRDNLR 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphasNP_001163283.1 G-alpha 44..379 CDD:206639 143/338 (42%)
gpa-16NP_490790.1 G_alpha 13..355 CDD:214595 154/362 (43%)
G-alpha 34..351 CDD:206639 143/338 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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