DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphas and gnat2

DIOPT Version :9

Sequence 1:NP_001163283.1 Gene:Galphas / 37805 FlyBaseID:FBgn0001123 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_571944.1 Gene:gnat2 / 140429 ZFINID:ZDB-GENE-011128-10 Length:354 Species:Danio rerio


Alignment Length:373 Identity:158/373 - (42%)
Similarity:219/373 - (58%) Gaps:30/373 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SDVNSEDSKSQKRRSDAISRQLQKDKQLYRATHRLLLLGAGESGKSTIVKQMRILHVDGFSDSEK 76
            |..::|| |...::|..:.:|||:|......|.:||||||||||||||||||:|||..|::..|:
Zfish     3 SGASAED-KEMAKKSKELEKQLQEDADKEAKTVKLLLLGAGESGKSTIVKQMKILHQGGYTKEEQ 66

  Fly    77 KQKIDDIKKNIRDAILTITGAMSTLN----PPVALEKKENEPRVEYIQDYASSPDFNYPPEFYEH 137
            .:....|..||..:.|.|...|..|:    .|.|   :|:..:::.:.|  |..:...|||..:.
Zfish    67 MEFRSIIFGNILQSALAIIRGMEMLSINFGSPSA---QEDSQKLQNLSD--SIEEGTMPPELADV 126

  Fly   138 TEELWKDKGVLQTYERSNEYQLIDCAKYFLDRVSTIKNPNYTPNEQDILRCRVLTSGIFETRFQV 202
            .:.||||.||..:::|:.||||.|.|.|:|:.:..|..|:|.|.|||:||.||.|:||.|.:|..
Zfish   127 IKRLWKDAGVQASFDRAAEYQLNDSAGYYLNEMDRICKPDYLPTEQDVLRSRVKTTGIIEEQFGC 191

  Fly   203 DKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMVLREDPTQNRLRESLDLFKSIWNN 267
            .:::|.||||||||.||:|||.||..||.|||..|.|:|:|||.||...||:.|||.||.||.|:
Zfish   192 KELHFRMFDVGGQRSERKKWIHCFEGVTCIIFCGALSAYDMVLVEDDEVNRMHESLHLFNSICNH 256

  Fly   268 RWLRTISIILFLNKQDLLAEKIKAGKSKLSEYFSEFNKYQTPIDTGDAIMESNDDPEVIRAKYFI 332
            |:..|.||:|||||:||..||||  |..||..|.:::...|..|                |..:|
Zfish   257 RFFATTSIVLFLNKKDLFQEKIK--KVHLSICFPDYDGPNTYED----------------ASNYI 303

  Fly   333 RDEFLRISTASGDGKHYCYPHFTCAVDTENIKRVFNDCRDIIQRMHLR 380
            :.:|..::...|..:  .|.|.|||.||:|::.|||...|||.:.:|:
Zfish   304 KTQFQDLNMKKGVKE--IYSHMTCATDTKNVEIVFNAVTDIIIKENLK 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphasNP_001163283.1 G-alpha 44..379 CDD:206639 147/338 (43%)
gnat2NP_571944.1 G_alpha 13..352 CDD:214595 154/362 (43%)
G-alpha 34..348 CDD:206639 147/338 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0082
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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