DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Galphas and gnat2

DIOPT Version :9

Sequence 1:NP_001163283.1 Gene:Galphas / 37805 FlyBaseID:FBgn0001123 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_001135577.1 Gene:gnat2 / 100216126 XenbaseID:XB-GENE-6258657 Length:354 Species:Xenopus tropicalis


Alignment Length:370 Identity:161/370 - (43%)
Similarity:222/370 - (60%) Gaps:24/370 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SDVNSEDSKSQKRRSDAISRQLQKDKQLYRATHRLLLLGAGESGKSTIVKQMRILHVDGFSDSEK 76
            |..::|| |...:||..:.::||:|..:...|.:||||||||||||||||||:|:|.||:|:.|.
 Frog     3 SGASAED-KELAKRSKELEKKLQEDAAMDAKTVKLLLLGAGESGKSTIVKQMKIIHQDGYSEQEC 66

  Fly    77 KQKIDDIKKNIRDAILTITGAMSTLNPPVALEKKENEPRV-EYIQDYASSPDFNYPPEFYEHTEE 140
            .:....|..||..:||.|..|||||........:.::.|: .::.|  |..:...|.|..:..::
 Frog    67 IEFRAIIYGNILQSILAIIRAMSTLGIDYGDSSRADDGRILSHLAD--SIEEGTMPQELVDVIKK 129

  Fly   141 LWKDKGVLQTYERSNEYQLIDCAKYFLDRVSTIKNPNYTPNEQDILRCRVLTSGIFETRFQVDKV 205
            ||||.||...:||:.||||.|.|.|:|:::..|...||.|||||:||.||.|:||.|::|....:
 Frog   130 LWKDDGVQACFERAAEYQLNDSAAYYLNQLDRITASNYIPNEQDVLRSRVKTTGIIESQFSFKDL 194

  Fly   206 NFHMFDVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMVLREDPTQNRLRESLDLFKSIWNNRWL 270
            :|.||||||||.||:|||.||..||.|||..|.|:|:|||.||...||:.|||.||.||.|:::.
 Frog   195 HFRMFDVGGQRSERKKWIHCFEGVTCIIFCGALSAYDMVLVEDEEVNRMHESLHLFNSICNHKFF 259

  Fly   271 RTISIILFLNKQDLLAEKIKAGKSKLSEYFSEFNKYQTPIDTGDAIMESNDDPEVIRAKYFIRDE 335
            ...||:|||||:||..:|||  |..||..|.:::...|..|.|:                :|:.:
 Frog   260 AATSIVLFLNKKDLFEQKIK--KVHLSICFPDYDGPNTFDDAGN----------------YIKQQ 306

  Fly   336 FLRISTASGDGKHYCYPHFTCAVDTENIKRVFNDCRDIIQRMHLR 380
            ||.::... |.|. .|.|.|||.||:|:|.||:...|||.:..|:
 Frog   307 FLDLNMRK-DSKE-IYGHMTCATDTQNVKFVFDAVTDIIIKETLK 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphasNP_001163283.1 G-alpha 44..379 CDD:206639 150/335 (45%)
gnat2NP_001135577.1 G-alpha 34..348 CDD:206639 150/335 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.