DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Galphas and gnat2

DIOPT Version :10

Sequence 1:NP_477505.1 Gene:Galphas / 37805 FlyBaseID:FBgn0001123 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_001135577.1 Gene:gnat2 / 100216126 XenbaseID:XB-GENE-6258657 Length:354 Species:Xenopus tropicalis


Alignment Length:370 Identity:161/370 - (43%)
Similarity:222/370 - (60%) Gaps:24/370 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SDVNSEDSKSQKRRSDAISRQLQKDKQLYRATHRLLLLGAGESGKSTIVKQMRILHVDGFSDSEK 76
            |..::|| |...:||..:.::||:|..:...|.:||||||||||||||||||:|:|.||:|:.|.
 Frog     3 SGASAED-KELAKRSKELEKKLQEDAAMDAKTVKLLLLGAGESGKSTIVKQMKIIHQDGYSEQEC 66

  Fly    77 KQKIDDIKKNIRDAILTITGAMSTLNPPVALEKKENEPRV-EYIQDYASSPDFNYPPEFYEHTEE 140
            .:....|..||..:||.|..|||||........:.::.|: .::.|  |..:...|.|..:..::
 Frog    67 IEFRAIIYGNILQSILAIIRAMSTLGIDYGDSSRADDGRILSHLAD--SIEEGTMPQELVDVIKK 129

  Fly   141 LWKDKGVLQTYERSNEYQLIDCAKYFLDRVSTIKNPNYTPNEQDILRCRVLTSGIFETRFQVDKV 205
            ||||.||...:||:.||||.|.|.|:|:::..|...||.|||||:||.||.|:||.|::|....:
 Frog   130 LWKDDGVQACFERAAEYQLNDSAAYYLNQLDRITASNYIPNEQDVLRSRVKTTGIIESQFSFKDL 194

  Fly   206 NFHMFDVGGQRDERRKWIQCFNDVTAIIFVTACSSYNMVLREDPTQNRLRESLDLFKSIWNNRWL 270
            :|.||||||||.||:|||.||..||.|||..|.|:|:|||.||...||:.|||.||.||.|:::.
 Frog   195 HFRMFDVGGQRSERKKWIHCFEGVTCIIFCGALSAYDMVLVEDEEVNRMHESLHLFNSICNHKFF 259

  Fly   271 RTISIILFLNKQDLLAEKIKAGKSKLSEYFSEFNKYQTPIDTGDAIMESNDDPEVIRAKYFIRDE 335
            ...||:|||||:||..:|||  |..||..|.:::...|..|.|:                :|:.:
 Frog   260 AATSIVLFLNKKDLFEQKIK--KVHLSICFPDYDGPNTFDDAGN----------------YIKQQ 306

  Fly   336 FLRISTASGDGKHYCYPHFTCAVDTENIKRVFNDCRDIIQRMHLR 380
            ||.::... |.|. .|.|.|||.||:|:|.||:...|||.:..|:
 Frog   307 FLDLNMRK-DSKE-IYGHMTCATDTQNVKFVFDAVTDIIIKETLK 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphasNP_477505.1 G-alpha 44..379 CDD:206639 150/335 (45%)
gnat2NP_001135577.1 G-alpha 34..348 CDD:206639 150/335 (45%)

Return to query results.
Submit another query.