DRSC/TRiP Functional Genomics Resources

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Protein Alignment Galphas and gnat1

DIOPT Version :9

Sequence 1:NP_001163283.1 Gene:Galphas / 37805 FlyBaseID:FBgn0001123 Length:385 Species:Drosophila melanogaster
Sequence 2:NP_001096278.1 Gene:gnat1 / 100124843 XenbaseID:XB-GENE-1003264 Length:350 Species:Xenopus tropicalis


Alignment Length:363 Identity:154/363 - (42%)
Similarity:221/363 - (60%) Gaps:23/363 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SKSQKRRSDAISRQLQKDKQLYRATHRLLLLGAGESGKSTIVKQMRILHVDGFSDSEKKQKIDDI 83
            :.::::.|..:.::|::|.:....|.:||||||||||||||||||:|:|.||:|..|..:.|..|
 Frog     5 ASAEEKHSRELEKKLKEDAEKDARTVKLLLLGAGESGKSTIVKQMKIIHQDGYSLEECLEFISII 69

  Fly    84 KKNIRDAILTITGAMSTLNPPVALEKKENEPR-VEYIQDYASSPDFNYPPEFYEHTEELWKDKGV 147
            ..|...::|.|..||:|||.......::::.| :.::.|  :..:.:.|.|..:....||||.|:
 Frog    70 YGNTLQSMLAIVRAMNTLNIQYGDPARQDDSRKLLHLAD--TIDEGSMPKEMSDIIGRLWKDTGI 132

  Fly   148 LQTYERSNEYQLIDCAKYFLDRVSTIKNPNYTPNEQDILRCRVLTSGIFETRFQVDKVNFHMFDV 212
            ...::|::||||.|.|.|:|:.:..:..|.|.|.|||:||.||.|:||.||:|....:||.||||
 Frog   133 QACFDRASEYQLNDSAGYYLNDLERLVTPGYVPTEQDVLRSRVKTTGIIETQFGFKDLNFRMFDV 197

  Fly   213 GGQRDERRKWIQCFNDVTAIIFVTACSSYNMVLREDPTQNRLRESLDLFKSIWNNRWLRTISIIL 277
            ||||.||:|||.||..||.|||:.|.|:|:|||.||...||:.|||.||.||.|:|:..|.||:|
 Frog   198 GGQRSERKKWIHCFEGVTCIIFIAALSAYDMVLVEDDEVNRMHESLHLFNSICNHRYFATTSIVL 262

  Fly   278 FLNKQDLLAEKIKAGKSKLSEYFSEFNKYQTPIDTGDAIMESNDDPEVIRAKYFIRDEFLRISTA 342
            ||||:|:..||||  |:.||..|.:::...|..|.|.                :|:.:||.::..
 Frog   263 FLNKKDVFTEKIK--KAHLSICFPDYDGPNTYEDAGS----------------YIKTQFLELNMR 309

  Fly   343 SGDGKHYCYPHFTCAVDTENIKRVFNDCRDIIQRMHLR 380
            . |.|. .|.|.|||.||||:|.||:...|||.:.:|:
 Frog   310 R-DVKE-IYSHMTCATDTENVKFVFDAVTDIIIKENLK 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalphasNP_001163283.1 G-alpha 44..379 CDD:206639 149/335 (44%)
gnat1NP_001096278.1 G-alpha 30..344 CDD:206639 149/335 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D754573at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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