DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2812 and wdr47b

DIOPT Version :9

Sequence 1:NP_611850.1 Gene:CG2812 / 37801 FlyBaseID:FBgn0034931 Length:348 Species:Drosophila melanogaster
Sequence 2:NP_001188350.1 Gene:wdr47b / 567031 ZFINID:ZDB-GENE-121114-10 Length:871 Species:Danio rerio


Alignment Length:331 Identity:177/331 - (53%)
Similarity:224/331 - (67%) Gaps:7/331 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 ERPH--FEAVTTLSDSQAIRSVDFHPNGKLYAVGSNSKTFRICQYPALSKLRHGHQAAVYPPSVL 78
            |:|.  |.||.||.|:||:|:|.|||:|.|||:||||||.|:|.||  ..|:...||.|..|.:.
Zfish   543 EKPKSPFIAVQTLEDTQAVRAVAFHPSGMLYAIGSNSKTLRVCTYP--QSLKTSPQAPVKQPDIC 605

  Fly    79 CKRTKHHRGSIYCTCWSRDGELIATGSNDKTIKYMRFNNDTNQLVGHEMELNMHDGTVRDMCFLD 143
            .||.|||:|||||..||..|:|:|||||||.:|.:.||.||....|.::|.:|||||:||:.|::
Zfish   606 FKRIKHHKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNADTCNATGPDLEFSMHDGTIRDLAFME 670

  Fly   144 DSSTKSRLLASGGAGDCKIYITDCGTGTPFQAYSGHTGHILSLYSWNNAMFVSGSQDQTIRFWDL 208
            ...:...:|.|.|||||.||.|||..|....|.|||||||||||:|...|..|||||:|:|||||
Zfish   671 GPESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILSLYTWGGWMIASGSQDKTVRFWDL 735

  Fly   209 RVNVSVNTLDNDRKDGGLESSAVTAVCVDPTGRLLVSGHADSSCTLYDIRGNRPIQRFYPHTAEI 273
            ||...|..:.......|   |||.:|.:||:|||:.:|..|..|.||||||.|.:|.:.||::::
Zfish   736 RVPSCVKVVGTTLHGTG---SAVASVAIDPSGRLMATGLEDCRCMLYDIRGGRSVQVYRPHSSDV 797

  Fly   274 RCVRFSPSAYYMLTCSYDNSIRLTDLQGDLAHELSSVVVAEHKDKAITIRWHPTEFSFISTSADK 338
            |.|||||.|:|:||.|||:.:.::||||||...|...|||||.||.|..|||..:.||:|:||||
Zfish   798 RSVRFSPGAHYLLTGSYDSRVMISDLQGDLTKNLPVTVVAEHADKVIQCRWHTRDLSFLSSSADK 862

  Fly   339 TATLWA 344
            |.||||
Zfish   863 TVTLWA 868

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2812NP_611850.1 WD40 10..>346 CDD:225201 177/331 (53%)
WD40 32..344 CDD:238121 165/311 (53%)
WD40 repeat 34..84 CDD:293791 25/49 (51%)
WD40 repeat 90..131 CDD:293791 20/40 (50%)
WD40 repeat 136..177 CDD:293791 17/40 (43%)
WD40 repeat 185..218 CDD:293791 19/32 (59%)
WD40 repeat 231..267 CDD:293791 18/35 (51%)
WD40 repeat 273..312 CDD:293791 20/38 (53%)
WD40 repeat 319..343 CDD:293791 13/23 (57%)
wdr47bNP_001188350.1 LisH 9..42 CDD:128913
CTLH 47..100 CDD:128914
WD40 repeat 522..554 CDD:293791 5/10 (50%)
WD40 558..868 CDD:238121 167/314 (53%)
WD40 558..>867 CDD:225201 166/313 (53%)
WD40 repeat 563..611 CDD:293791 25/49 (51%)
WD40 repeat 617..658 CDD:293791 20/40 (50%)
WD40 repeat 663..704 CDD:293791 17/40 (43%)
WD40 repeat 711..748 CDD:293791 20/36 (56%)
WD40 repeat 755..791 CDD:293791 18/35 (51%)
WD40 repeat 797..837 CDD:293791 21/39 (54%)
WD40 repeat 843..867 CDD:293791 13/23 (57%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581902
Domainoid 1 1.000 66 1.000 Domainoid score I9917
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003966
OrthoInspector 1 1.000 - - otm24369
orthoMCL 1 0.900 - - OOG6_106013
Panther 1 1.100 - - O PTHR19863
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3260
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.840

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