DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2812 and wdr47a

DIOPT Version :10

Sequence 1:NP_611850.1 Gene:CG2812 / 37801 FlyBaseID:FBgn0034931 Length:348 Species:Drosophila melanogaster
Sequence 2:XP_001922619.3 Gene:wdr47a / 558528 ZFINID:ZDB-GENE-070216-3 Length:902 Species:Danio rerio


Alignment Length:324 Identity:174/324 - (53%)
Similarity:215/324 - (66%) Gaps:5/324 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 FEAVTTLSDSQAIRSVDFHPNGKLYAVGSNSKTFRICQYPALSKLRHGHQAAVYPPSVLCKRTKH 84
            |..|.||.|:||:|:|.|||.|.||||||||||.|:|.||  ..|.........||.:..||.||
Zfish   580 FVMVNTLEDTQAVRAVAFHPTGALYAVGSNSKTLRVCAYP--DTLDTSGTGTNKPPVIRFKRNKH 642

  Fly    85 HRGSIYCTCWSRDGELIATGSNDKTIKYMRFNNDTNQLVGHEMELNMHDGTVRDMCFLDDSSTKS 149
            |:|||||..||..|:|:|||||||.:|.:.||.:|....|.::|.:|||||:||:.|::......
Zfish   643 HKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNPETCNATGPDLEFSMHDGTIRDLAFMEGPECGG 707

  Fly   150 RLLASGGAGDCKIYITDCGTGTPFQAYSGHTGHILSLYSWNNAMFVSGSQDQTIRFWDLRVNVSV 214
            .:|.|.|||||.||.|||..|....|.|||||||||||:|...|..|||||:|:|||||||...|
Zfish   708 AILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILSLYTWGGWMIASGSQDKTVRFWDLRVPSCV 772

  Fly   215 NTLDNDRKDGGLESSAVTAVCVDPTGRLLVSGHADSSCTLYDIRGNRPIQRFYPHTAEIRCVRFS 279
            ..:....:..|   |.|.:|.|||:||||.:|..||||.||||||.|.:|.:.||::::|.||||
Zfish   773 RVVGTAFQGSG---SPVASVAVDPSGRLLATGQEDSSCMLYDIRGGRMVQTYKPHSSDVRSVRFS 834

  Fly   280 PSAYYMLTCSYDNSIRLTDLQGDLAHELSSVVVAEHKDKAITIRWHPTEFSFISTSADKTATLW 343
            |.|:|:||.||||.:.:|||||||..:|...||.||.||.|..|||....||:|:|||:|.|||
Zfish   835 PGAHYLLTGSYDNKVIVTDLQGDLTKQLPLTVVGEHGDKVIQCRWHSHHLSFLSSSADRTVTLW 898

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2812NP_611850.1 WD40 <5..346 CDD:441893 174/324 (54%)
WD40 repeat 34..84 CDD:293791 24/49 (49%)
WD40 repeat 90..131 CDD:293791 19/40 (48%)
WD40 repeat 136..177 CDD:293791 17/40 (43%)
WD40 repeat 185..218 CDD:293791 19/32 (59%)
WD40 repeat 231..267 CDD:293791 22/35 (63%)
WD40 repeat 273..312 CDD:293791 22/38 (58%)
WD40 repeat 319..343 CDD:293791 12/23 (52%)
wdr47aXP_001922619.3 LisH_TPL 13..40 CDD:375350
CTLH 47..102 CDD:128914
WD40 <589..898 CDD:441893 167/313 (53%)
WD40 repeat 594..642 CDD:293791 24/49 (49%)
WD40 repeat 648..689 CDD:293791 19/40 (48%)
WD40 repeat 694..735 CDD:293791 17/40 (43%)
WD40 repeat 742..779 CDD:293791 20/36 (56%)
WD40 repeat 786..822 CDD:293791 22/35 (63%)
WD40 repeat 828..868 CDD:293791 23/39 (59%)
Blue background indicates that the domain is not in the aligned region.

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