DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2812 and wdr47

DIOPT Version :10

Sequence 1:NP_611850.1 Gene:CG2812 / 37801 FlyBaseID:FBgn0034931 Length:348 Species:Drosophila melanogaster
Sequence 2:XP_031756900.1 Gene:wdr47 / 100127667 XenbaseID:XB-GENE-5787016 Length:919 Species:Xenopus tropicalis


Alignment Length:328 Identity:170/328 - (51%)
Similarity:225/328 - (68%) Gaps:5/328 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 ERPHFEAVTTLSDSQAIRSVDFHPNGKLYAVGSNSKTFRICQYPALSKLRHGHQAAVYPPSVLCK 80
            ::..|..:|:|.|:||:|:|.|||:|.||||||||||.|:|.||.:....:.: ....|| |..|
 Frog   593 KKQQFVCLTSLEDTQAVRAVAFHPSGSLYAVGSNSKTLRVCAYPDVIDTSNSN-CPTQPP-VRFK 655

  Fly    81 RTKHHRGSIYCTCWSRDGELIATGSNDKTIKYMRFNNDTNQLVGHEMELNMHDGTVRDMCFLDDS 145
            |.|||:|||||..||..|:|:|||||||.:|.:.|:.:|....|.::|.:|||||:||:.|::..
 Frog   656 RNKHHKGSIYCVAWSPCGQLLATGSNDKYVKVLPFSAETCNATGPDLEFSMHDGTIRDLAFMEGP 720

  Fly   146 STKSRLLASGGAGDCKIYITDCGTGTPFQAYSGHTGHILSLYSWNNAMFVSGSQDQTIRFWDLRV 210
            .:...:|.|.|||||.||.|||..|....|.||||||||:||:|:..|..|||||:|:|||||||
 Frog   721 ESGGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILALYTWSGWMIASGSQDKTVRFWDLRV 785

  Fly   211 NVSVNTLDNDRKDGGLESSAVTAVCVDPTGRLLVSGHADSSCTLYDIRGNRPIQRFYPHTAEIRC 275
            ...|..:.......|   |||.:|.|||:||||.:|..||||.||||||.|.:|.::||::::|.
 Frog   786 PSCVRVIGTTFHGTG---SAVASVAVDPSGRLLATGQEDSSCMLYDIRGGRMVQSYHPHSSDVRS 847

  Fly   276 VRFSPSAYYMLTCSYDNSIRLTDLQGDLAHELSSVVVAEHKDKAITIRWHPTEFSFISTSADKTA 340
            |||||.|:|:||.|||..:::|||||||...|..:.|.|||||.|..|||..:.||:|:|||:|.
 Frog   848 VRFSPGAHYLLTGSYDMKVKVTDLQGDLTKPLPIIEVGEHKDKVIQCRWHTQDLSFLSSSADRTV 912

  Fly   341 TLW 343
            :||
 Frog   913 SLW 915

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2812NP_611850.1 WD40 <5..346 CDD:441893 170/328 (52%)
WD40 repeat 34..84 CDD:293791 24/49 (49%)
WD40 repeat 90..131 CDD:293791 18/40 (45%)
WD40 repeat 136..177 CDD:293791 17/40 (43%)
WD40 repeat 185..218 CDD:293791 18/32 (56%)
WD40 repeat 231..267 CDD:293791 22/35 (63%)
WD40 repeat 273..312 CDD:293791 21/38 (55%)
WD40 repeat 319..343 CDD:293791 11/23 (48%)
wdr47XP_031756900.1 LisH_TPL 13..40 CDD:375350
CTLH 47..102 CDD:128914
Myosin_tail_1 <422..>500 CDD:460256
WD40 600..915 CDD:441893 167/319 (52%)
WD40 repeat 611..659 CDD:293791 24/49 (49%)
WD40 repeat 665..706 CDD:293791 18/40 (45%)
WD40 repeat 711..752 CDD:293791 17/40 (43%)
WD40 repeat 762..795 CDD:293791 17/32 (53%)
WD40 repeat 803..837 CDD:293791 21/33 (64%)
WD40 repeat 845..885 CDD:293791 21/39 (54%)
WD40 repeat 891..915 CDD:293791 11/23 (48%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.