DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kcc and slc12a6

DIOPT Version :9

Sequence 1:NP_001286795.1 Gene:kcc / 37800 FlyBaseID:FBgn0261794 Length:1077 Species:Drosophila melanogaster
Sequence 2:XP_012820954.1 Gene:slc12a6 / 780031 XenbaseID:XB-GENE-960699 Length:1133 Species:Xenopus tropicalis


Alignment Length:1104 Identity:604/1104 - (54%)
Similarity:781/1104 - (70%) Gaps:85/1104 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SAKDDSDEMEIIPSEHNGTVHETKNEDSGDIHRAEENQKSSIDPNLYLYDDDLETRPHISTFISS 69
            |..:::.::..|....:..:::...:|.||          |.|.||.|::::::|||.:|:.::.
 Frog    84 SVTEENSKLLDIDRRKSSVLYQNHTDDEGD----------SYDRNLALFEEEMDTRPKVSSLLNR 138

  Fly    70 IANYENTIPAATDPD-----AKPAAPSARMGTLIGVFLPCIQNIFGVILFIRLTWVVGTAGAVCG 129
            :|||.|....|.:.:     .|.||.:.||||::||:|||:|||||||||:||.|||||||.:..
 Frog   139 LANYTNLPQGAKEHEEESEGKKKAAKTPRMGTIMGVYLPCLQNIFGVILFLRLPWVVGTAGVLHA 203

  Fly   130 FLIVLTCCCVTMLTAISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGMLFYTGTTLAAAMYIV 194
            |.||..|||.|||||||||||||||||||||:||||||:||||||||||:.||.|||.|.||||:
 Frog   204 FCIVFACCCCTMLTAISMSAIATNGVVPAGGAYFMISRALGPEFGGAVGLCFYLGTTFATAMYIL 268

  Fly   195 GAVEIVLTYMAPWASIF-GD-FTKDADAMYNNFRVYGTLLLIFMGLIVFLGVKFVNKFATVALAC 257
            ||:||.|.|::|.|.|| |: ..:::.||.||.|||||..||.|.:|||:||::|||.|:|.|.|
 Frog   269 GAIEIFLVYISPQAVIFHGEGVAEESAAMLNNMRVYGTGFLIIMSIIVFVGVRYVNKLASVFLTC 333

  Fly   258 VILSIIAVYVGIFDNIHGNEKLYMCVLGKRLLKDIPLENCTK---EDSF-----LRDIYCP---- 310
            ||:||:|:|.|...:........:|:||.|.|.......|.|   .|:.     |.:::|.    
 Frog   334 VIMSILAIYAGALKSAFSPPDFPICLLGNRTLSKHHFTECAKIVESDNMTIVTDLWNLFCHPSDQ 398

  Fly   311 -DGKCEEYYLANNVTKVKGIKGLASGVFYDNIFPSFLEKGQFISYGKSAI-DIENTSGESYNQIM 373
             :|.|:||:..||||.|:||.||.||:..:|::.::|:||..|.  |::: ..|..:.:|...::
 Frog   399 LNGTCDEYFAHNNVTLVQGIPGLKSGIISENLWSNYLQKGDIIE--KASLPSTEYLAVQSQEYVL 461

  Fly   374 ADITTSFTLLIGIFFPSVTGIMAGSNRSGDLADAQKSIPIGTICAILTTSTVYLSSVMFFAGTVD 438
            ||||||||||:||||||||||||||||||||.|||||||||||.||||||.||||:|:.|..::|
 Frog   462 ADITTSFTLLVGIFFPSVTGIMAGSNRSGDLKDAQKSIPIGTILAILTTSLVYLSNVILFGASID 526

  Fly   439 NLLLRDKFGQSIGGKLVVANIAWPNQWVILIGSFLSTLGAGLQSLTGAPRLLQAIARDEIIPFLA 503
            .::||||||.::.|.|||..::||:.|||:||||.||.||||||||||||||||||:|.|||||.
 Frog   527 GVVLRDKFGDAVKGTLVVGALSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDGIIPFLR 591

  Fly   504 PFAKSSKRGEPTRALLLTIVICQCGILLGNVDLLAPLLSMFFLMCYGFVNLACAVQTLLRTPNWR 568
            .|......||||.|||||.||.:.|||:.::||:||:|||||||||.||||||.:||||.:||||
 Frog   592 VFGHGKSNGEPTWALLLTAVIAELGILIASLDLVAPILSMFFLMCYLFVNLACGLQTLLHSPNWR 656

  Fly   569 PRFKFYHWSLSLIGLTLCISVMIMTSWYFALIAMGMAIIIYKYIEYRGAEKEWGDGIRGMALTAA 633
            |||.:|||:||.:|:.||:::|.::|||:|||:|.:|.:|||||||:||||||||||||::|:||
 Frog   657 PRFHYYHWTLSFLGMALCLALMFISSWYYALISMVIAGMIYKYIEYQGAEKEWGDGIRGLSLSAA 721

  Fly   634 RYSLLRLEEGPPHTKNWRPQILVLSKLNDNLLPKYRKIFSFATQLKAGKGLTICVSVIKGDHTKI 698
            |::|||||||||||||||||:|||.||:.:|.....::.|||:||||||||||..||:.||:.:.
 Frog   722 RFALLRLEEGPPHTKNWRPQLLVLVKLDSDLHVSQPRLLSFASQLKAGKGLTIVGSVLLGDYLEN 786

  Fly   699 TNKAVDAKATLRKYMTDEKVKGFCDVLVAQQIGEGLSSVIQTIGLGGMKPNTVIIGWPYSWRQ-E 762
            ..:|..|:..|:..|..|||||||.|:|||::.||||.:||:.|||||:.||||:.||.|||| :
 Frog   787 HAEAQAAEQALKHLMEQEKVKGFCQVVVAQKLKEGLSHLIQSCGLGGMRHNTVIMSWPSSWRQSD 851

  Fly   763 GRNSWKTFIQTVRTVAACHMALMVPKGINFYPESNHKIG-GNIDIWWIVHDGGLLMLLPFLLKQH 826
            ...:||:||.|:|...|...||:|.|.::.:|.|...:. |:||:||||||||:|||||||||||
 Frog   852 DSRAWKSFITTIRVTTAARQALLVAKNVSLFPGSREILAEGHIDVWWIVHDGGMLMLLPFLLKQH 916

  Fly   827 RTWRNCKLRIFTVAQIEDNSIQMKKDLKTFLYHLRIEADVEVVEMNNSDISAYTYERTLMMEQRN 891
            :.||.||:|||||||:|||||||||||.||||||||.||||||||::|||||||||||||||||:
 Frog   917 KVWRKCKMRIFTVAQMEDNSIQMKKDLATFLYHLRIAADVEVVEMHDSDISAYTYERTLMMEQRS 981

  Fly   892 QMLRALGLNKKENSKVVQTIMDYKETPSDNKMSLVQTIVDHHYDATKTASKVRFADPTIEETQHH 956
            ||||.:.|:|.:..|..|.:.|      .|.|..:.::                           
 Frog   982 QMLRQMRLSKTDREKEAQLVKD------RNSMLRLTSV--------------------------- 1013

  Fly   957 DSQNDEKRNSIDLDGPENADTPETTSNKDE------STEKADGDFKS--SVKPDEFNVRRMHTAI 1013
            .|.:||...::       .|....|..||:      :..|....|:.  :::||:.||||||||:
 Frog  1014 GSDDDEDTEAV-------PDRVHMTWTKDKHHAVRVAQSKPMPSFQDLLNIRPDQSNVRRMHTAV 1071

  Fly  1014 KLNEVIVEKSQDAQLVIMNLPGPPREVRAERERNYMEFLEVLTEGLEKVLMVRGGGREVITIYS 1077
            |||||||.||.||:||::|:|||||  ..:.:.||||||||||||||.||:|||||.|||||||
 Frog  1072 KLNEVIVNKSHDAKLVLLNMPGPPR--NPQGDENYMEFLEVLTEGLEHVLLVRGGGTEVITIYS 1133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kccNP_001286795.1 2a30 49..1077 CDD:273347 595/1058 (56%)
SLC12 674..1077 CDD:281515 217/412 (53%)
slc12a6XP_012820954.1 2a30 104..1133 CDD:273347 600/1082 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 429 1.000 Domainoid score I592
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1154 1.000 Inparanoid score I208
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D110005at33208
OrthoFinder 1 1.000 - - FOG0000627
OrthoInspector 1 1.000 - - otm48284
Panther 1 1.100 - - O PTHR11827
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3041
SonicParanoid 1 1.000 - - X451
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.190

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