DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kcc and slc12a10.3

DIOPT Version :9

Sequence 1:NP_001286795.1 Gene:kcc / 37800 FlyBaseID:FBgn0261794 Length:1077 Species:Drosophila melanogaster
Sequence 2:XP_021333240.1 Gene:slc12a10.3 / 562763 ZFINID:ZDB-GENE-060503-518 Length:1001 Species:Danio rerio


Alignment Length:1180 Identity:304/1180 - (25%)
Similarity:478/1180 - (40%) Gaps:322/1180 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PSEHNGTVHETKNEDSGD--IHRAEENQKSSI------DPNLYLYDDDLET------RPHISTFI 67
            |.|:| ....|.|.:..|  :.:.::.:|.||      .|....|..|..|      ||.:....
Zfish    22 PPENN-LQDVTMNLEKVDYVMEQEQDKRKMSIFNPLDPTPKFEFYAKDTWTGRIKSARPSLDVLR 85

  Fly    68 SSIANYENTIPAATDPDAKPAAPSARMGTLIGVFLPCIQNIFGVILFIRLTWVVGTAGAVCGFLI 132
            .|  ...:.:|...:.|.:|.....|.|.::||.:.|:.||:|||:|:||.|:...||.:..::|
Zfish    86 KS--PDPDDLPPPPEDDGRPKVKLVRFGWVLGVMIRCMLNIWGVIMFLRLPWITSQAGIILTYVI 148

  Fly   133 VLTCCCVTMLTAISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGMLFYTGTTLAAAMYIVGAV 197
            :.....:|.:||.|:|||:|||.|.:||:||:||||||||.|..:|:||.....||.::..||..
Zfish   149 IFMSVTITTITATSVSAISTNGKVYSGGTYFLISRSLGPELGAPIGLLFSFANALACSLNTVGFA 213

  Fly   198 EIVLTYMAPWASIFGDFTKDADAM----YNNFRVYGTLLLIFMGLIVFLGVKFVNKFATVALACV 258
            |.|           .|..|:.:|.    .|:.|:.||:.:..:.||.|.|:.:..|...:....:
Zfish   214 ETV-----------RDVLKENNAQMVDDVNDVRIIGTITVCILLLITFAGMAWEAKAQILFFIAL 267

  Fly   259 ILSIIAVYVGIFDNIHGNEKLYMCVLGKRLLKDIPLENCTKEDSFLRDIYCPDGKCEEYYLANNV 323
            ::|:...:||                  .||...|.:...                         
Zfish   268 LISLANYFVG------------------TLLPPTPEKQAV------------------------- 289

  Fly   324 TKVKGIKGLASGVFYDNIFPSFLEKGQFISYGKSAIDIENTSGESYNQIMADITTSFTLLIGIFF 388
                |..|..:.:|.||:.|||        .||..                    ||..:..|||
Zfish   290 ----GFFGYRAEIFVDNLLPSF--------RGKDG--------------------SFFRMFSIFF 322

  Fly   389 PSVTGIMAGSNRSGDLADAQKSIPIGTICAILTTSTVYLSSVMFFAGTVDNLLLRDKFG------ 447
            ||.|||::|.|..|||.|....||.||:.||..|:..||    ..|.||...::||..|      
Zfish   323 PSATGILSGVNICGDLKDPSGGIPKGTLLAIFWTTVSYL----LIAITVAASVVRDASGNLNDSL 383

  Fly   448 --------QSIGGKL---------------------VVANIAWPNQWVILIGSFLSTLGAGLQSL 483
                    ..:|.||                     .:...|.....:|.||.|.:||.:.|..|
Zfish   384 ALDSSIQCSGLGCKLGWNFDHCEQNHTCSFGLANYFQILTTASGTGHLITIGIFAATLSSALGFL 448

  Fly   484 TGAPRLLQAIARDEIIPFLAPFAKS-SKRGEPTRALLLTIVICQCGILLGNVDLLAPLLSMFFLM 547
            ..||::.|.:.:|.|.|::..|.|. .|..||.|..||...|....||:|:::.:|||:|.|||.
Zfish   449 VSAPKIFQCLCKDNIYPYIGFFGKGYGKNQEPLRGYLLMFFIALAFILIGDLNTIAPLISNFFLC 513

  Fly   548 CYGFVNLACAVQTLLRTPNWRPRFKFYHWSLSLIGLTLCISVMIMTSWYFALIAMGMAIIIYKYI 612
            .||.:|.:|...|:.::|.|||.:.::....||....|...:|.:.:|:.||:...:.:.:..|:
Zfish   514 SYGLINFSCFHATITKSPGWRPHYHYFSPWTSLFAAFLSFILMFLFTWWAALVTFAIVLSLLGYV 578

  Fly   613 EYRGAEKEWGDGIR----GMALTAARYSLLRLEEGPPHTKNWRPQILVLSKLNDNLLPKYRKIFS 673
            .|:..:..||...:    .|||:.: .||..:|:   |.||:|||.|||:. ..|:.|   .:..
Zfish   579 TYKKPKINWGTSYQASFYNMALSFS-MSLTGVED---HVKNFRPQCLVLTG-PPNVRP---ALVD 635

  Fly   674 FATQLKAGKGLTICVSVIKGDHTKITNKAVDAKATLRKYMTD--------EKVKGFCDVLVAQQI 730
            |.........|.||.::.          .|:.|:...::.||        .||:.|.....|..:
Zfish   636 FVGTFTKNISLMICGNIF----------MVEEKSRFPQHSTDMLVDWLNQRKVRAFYTSFTADSL 690

  Fly   731 GEGLSSVIQTIGLGGMKPNTVIIGWPYSWRQEGRNSWKTFIQTVRT-------VAACHM------ 782
            .||..|::|..|||.:||||:::|:..:|::......:.:..|:..       :|...|      
Zfish   691 TEGTHSLMQASGLGKLKPNTLVLGYKTNWQECKPERLQDYFNTISDAFDSSYGIAVLRMMDGLDI 755

  Fly   783 ----------ALMVP--------KGINFYPESNHKI---GGN---------------IDIWWIVH 811
                      |:..|        |..|...:.|..|   |.|               |||:||..
Zfish   756 REDLTSGRSSAIDNPAFEADENTKSENEETDRNSDISDDGSNDQVKTVFQTKQGRKTIDIYWISD 820

  Fly   812 DGGLLMLLPFLLKQHRTWRNCKLRIFTVAQIEDNSIQMKKDLKTFLYHLRIEADVEVVEMNNSDI 876
            ||||.:|:|:||.:...|:..|:|:|.:.. ::...:..||:|..|...|:|.:         ||
Zfish   821 DGGLTLLVPYLLTRRNRWKKSKIRVFVLGD-QETMQEDHKDMKMLLKRFRLEIE---------DI 875

  Fly   877 SAYTYERTLMMEQRNQMLRALGLNKKENSKVVQTIMDYKETPSDNKMSLVQTIVDHHYDATKTAS 941
                                          :|.|.:|        |..|.:.:  ..||.:....
Zfish   876 ------------------------------IVITDVD--------KPPLAKNL--QRYDDSVAPF 900

  Fly   942 KVRFADPTIEETQHHDSQNDEKRNSIDLDGPENADTPETTSNKDESTEKADGDFKSSVKPDEFNV 1006
            ::      .||....|.|...:.|            |.|.|:||          ..:::|     
Zfish   901 RL------TEEQSRGDLQEFRRLN------------PWTVSDKD----------LEAIRP----- 932

  Fly  1007 RRMHTAIKLNEVIVEKSQDAQLVIMNLPGP----PREVRAERERNYMEFLEVLTEGLE-KVLMVR 1066
             ::...::|||:|.:.|..|.||:::||.|    |..:       ||.::|.|:.|:. ..|::|
Zfish   933 -KIERTVRLNEIIKKNSNHAALVVVSLPVPDLNCPSSL-------YMAWMEALSFGIHCPALLIR 989

  Fly  1067 GGGREVITIY 1076
            |....|:|.|
Zfish   990 GNQENVMTFY 999

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kccNP_001286795.1 2a30 49..1077 CDD:273347 294/1140 (26%)
SLC12 674..1077 CDD:281515 102/465 (22%)
slc12a10.3XP_021333240.1 SLC12 54..1000 CDD:332077 295/1147 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594139
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2083
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57166
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

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