DRSC/TRiP Functional Genomics Resources

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Protein Alignment kcc and NKCC

DIOPT Version :10

Sequence 1:NP_001286795.1 Gene:kcc / 37800 FlyBaseID:FBgn0261794 Length:1077 Species:Drosophila melanogaster
Sequence 2:NP_730938.1 Gene:NKCC / 40663 FlyBaseID:FBgn0051547 Length:1068 Species:Drosophila melanogaster


Alignment Length:1238 Identity:286/1238 - (23%)
Similarity:492/1238 - (39%) Gaps:352/1238 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QSNSAKDDSDEM--EIIPSEHNGTVHETKNEDSGDIHRAEE---------NQKSSIDPNLYLYDD 55
            ::.||:.|..:.  .:.|:.:...:|...:.::|:..|:..         .:||..:....|...
  Fly    21 EARSAESDQTDAAHPLPPTSNENHLHPKASGETGENRRSSRLSFRGFGNFLRKSDAERKFSLAQL 85

  Fly    56 DLETRPHISTFISSIANYEN---------------TIPAATDPDAKPAAPSARMGTLIGVFLPCI 105
            ..|:.|.:..:..|:.|.:.               |||   :|:.:......::|.::||.:||:
  Fly    86 TKESLPRLDNYRISMRNLKRPSIGELQGEAVDQSITIP---EPEPEATGGHIKLGWIVGVLIPCL 147

  Fly   106 QNIFGVILFIRLTWVVGTAGAVCGFLIVLTCCCVTMLTAISMSAIATNGVVPAGGSYFMISRSLG 170
            .||:||:||:||:|||..:|.:...:|:.....|.::|.:|:|||:|||.|..||.||:||||||
  Fly   148 LNIWGVMLFLRLSWVVAESGILQSLIIITISAVVCVITTLSLSAISTNGEVKGGGVYFIISRSLG 212

  Fly   171 PEFGGAVGMLFYTGTTLAAAMYIVGAVEIVLTYMAPWASIFGDFTKDADAMYNNFRVYGTLLLIF 235
            ||||.:||::|.....::|:|..:|..|.:...:.      .:..|..|...|:.|:.|::.::.
  Fly   213 PEFGASVGVVFAFANAVSASMNTIGFCESLNVLLK------NNDLKIVDNGINDIRIVGSITVLV 271

  Fly   236 MGLIVFLGVKFVNKFATVALACVILSIIAVYVGIFDNIHGNEKLYMCVLGKRLLKDIPLENCTKE 300
            :.||..:|:::..|.....:..::|:|....:|......|||:...                   
  Fly   272 LILICCVGMEWETKAQNFLIVTIVLAIFNFLIGAAIGPQGNEEQIS------------------- 317

  Fly   301 DSFLRDIYCPDGKCEEYYLANNVTKVKGIKGLASGVFYDNIFPSFLEKGQFISYGKSAIDIENTS 365
                                      :|..|.:.....:|.                        
  Fly   318 --------------------------RGFVGFSWATLKENF------------------------ 332

  Fly   366 GESYNQIMADITTSFTLLIGIFFPSVTGIMAGSNRSGDLADAQKSIPIGTICAILTTSTVYLSSV 430
            |..| :....:...|..:..|||||||||.||:|..|||.||..:||.||..::|.:.:.|...|
  Fly   333 GSDY-RYAEGVNHDFFSVFAIFFPSVTGIQAGANICGDLKDAGAAIPKGTFWSLLISMSSYALFV 396

  Fly   431 MFFAGTVDNLLLRDKFG---QSIGGKLV--------VANIAW-----------PNQW--VILIGS 471
            :|..|..    :||..|   ..:.|.:|        ..|..|           .:.|  :|..|.
  Fly   397 LFAGGAA----VRDASGIPADLVNGTIVSSELPCMATGNCTWGLFNSYEMMQEMSLWGPLIYAGC 457

  Fly   472 FLSTLGAGLQSLTGAPRLLQAIARDEIIPFLAPFAKS-SKRGEPTRALLLTIVICQCGILLGNVD 535
            |.:||...|.:|...|||:||:..|:|.|.|..|:|. .|.|||.|..:||..|....:|:|.::
  Fly   458 FAATLSTALTNLLSVPRLVQALGIDQIYPGLIFFSKPYGKHGEPYRGYVLTFFITTGFLLIGELN 522

  Fly   536 LLAPLLSMFFLMCYGFVNLACAVQTLLRTPNWRPRFKFYHWSLSLIGLTLCISVMIMTSWYFALI 600
            |:|||:|.|:|..|..:|........::...|||.||:|:..|||.|..:|:::|.:.::..|:|
  Fly   523 LIAPLISTFYLASYALINFCTFHAAFVKPLGWRPTFKYYNAWLSLFGFAMCVAIMFLINYVAAII 587

  Fly   601 AMGMAIIIYKYIEYRGAEKEWGDGIRGMALTAARYSLLRLEEGPPHTKNWRPQILVLSKLNDNLL 665
            ..|:...:|..:.||..|..||...:.....||..::.||:....|.||:.||:||||  .|   
  Fly   588 TFGIIFALYLVVMYRKPEANWGSTTQAQQYKAALMAVHRLQNVSDHVKNYHPQVLVLS--GD--- 647

  Fly   666 PKYR-KIFSFATQLKAGKGLTICVSVI--KGDHTKITNKAVDAKATLRKYMTDEKVKGFCDVLVA 727
            ||.| .:..|...|.....|....::|  :..:....:...|.    :||:...|:|.|.:|:..
  Fly   648 PKTRPPLVDFGYLLTKNNSLMFVANIIPVRVGYKNRQHLVKDG----QKYLDARKIKAFYNVIDG 708

  Fly   728 QQIGEGLSSVIQTIGLGGMKPNTVIIGWPYSWRQEGRNSWKTFIQTVRTVAACHMA---LMVPKG 789
            ..:.:|::::.::.|.|.|.||.|::|:...|.:..:...:::...:....:..|.   |.:|.|
  Fly   709 FSLEDGINALTKSTGFGKMSPNIVLVGYKPDWNRCRKEEVESYFSILYNAFSQRMGVALLRLPNG 773

  Fly   790 INF-----------------------------YPESN---------------------------- 797
            ::|                             .|.:|                            
  Fly   774 LDFSELSSEVTLPANGMGHMHTANAHGFTNELMPAANAASELLHIDSNLNLASMDSPNSSFTMPQ 838

  Fly   798 --------------------------HKIGGN---------------------IDIWWIVHDGGL 815
                                      |..||:                     ||::|:..||||
  Fly   839 PAPMPNMQRNSRSYKVTSSDEPAVTYHTKGGSDIPQNLLDAMTIFTRKQPKGTIDVFWLYDDGGL 903

  Fly   816 LMLLPFLLKQHRTWRNCKLRIFTVAQIEDNSIQMKKDLKTFLYHLRIEADVEVVEMNNSDISAYT 880
            .:|||:::.....|:|.|||:|.:...:|.. |.:|.:.:.|...||:                 
  Fly   904 TILLPYIISMRSHWQNSKLRVFAMCHGKDEE-QEEKSMASLLTKFRIK----------------- 950

  Fly   881 YERTLMMEQRNQMLRALGLNKKENSKVVQTIMDYKETPSDNKMSLVQTIVDHHYDATKTASKVRF 945
            |...:|::..::..||            .|::.:|                            |.
  Fly   951 YSELIMLKGVSEQPRA------------DTVLKHK----------------------------RL 975

  Fly   946 ADPTIEETQHHDSQNDEKRNSIDLDGPENADTPETTSNKDESTEKADGDFKSSVKPDEFNVRRMH 1010
            .:|.....::.....|::..|:                 .|.|.:                    
  Fly   976 IEPFRRGARNEFGITDDELQSM-----------------SEKTNR-------------------- 1003

  Fly  1011 TAIKLNEVIVEKSQDAQLVIMNLPGPPREVRAERERNYMEFLEVLTEGLE-KVLMVRGGGREVIT 1074
             .::::|::|:.|.:|.||:|:||.|.:|  |.....||.:||:||..:: .|.:.||....|:|
  Fly  1004 -QLRIHELVVKHSSNASLVVMSLPMPRKE--AISAPLYMSWLEMLTSDMKCPVALARGNQTPVLT 1065

  Fly  1075 IYS 1077
            :||
  Fly  1066 LYS 1068

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kccNP_001286795.1 AA_permease_2 49..1077 CDD:459263 275/1178 (23%)
NKCCNP_730938.1 AA_permease_2 85..1068 CDD:459263 274/1172 (23%)

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