DRSC/TRiP Functional Genomics Resources

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Protein Alignment kcc and Slc12a8

DIOPT Version :9

Sequence 1:NP_001286795.1 Gene:kcc / 37800 FlyBaseID:FBgn0261794 Length:1077 Species:Drosophila melanogaster
Sequence 2:NP_705889.2 Gene:Slc12a8 / 266733 RGDID:628730 Length:705 Species:Rattus norvegicus


Alignment Length:488 Identity:135/488 - (27%)
Similarity:219/488 - (44%) Gaps:118/488 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 GTLIGVFLPCIQNIFGVILFIRLTWVVGTAGAVCGFLIVLTCCCVTMLTAISMSAIATNGVVPAG 159
            ||..|||..|:.|||||:||:|..|:||..|.:.|.|:|.....|.::|.:|...:|.:|.:.:|
  Rat    39 GTWDGVFTSCMINIFGVVLFLRTGWLVGNTGVLLGLLLVSFVILVALITVLSGIGVAEHGWMGSG 103

  Fly   160 GSYFMISRSLGPEFGGAVGMLFYTGTTLAAAMYIVGAVEIVLTYMAPWASIFGDFTKDADAMYNN 224
            |.|.|||..||.:.||.||:|:..|..:|.|||:.|               |.:...|...:.|.
  Rat   104 GVYSMISSVLGGQMGGTVGLLYVFGQCVAGAMYLTG---------------FAESISDLLGLGNI 153

  Fly   225 FRVYGTLLLIFMGL--IVFLGVKFVNKFATVALACVILSIIAVYVGIFDNI---HGNEKLYMCVL 284
            :.|.|..:.:.:.|  |...|||::.:...:.|:.:.:|.:...||.|.::   ||       .:
  Rat   154 WAVRGISVAVLLALLGINLAGVKWIIRLQLLLLSLLAVSTLDFVVGSFTHLDPEHG-------FI 211

  Fly   285 GKRLLKDIPLENCTKEDSFLRDIYCPDGKCEEYYLANNVTKVKGIKGLASGVFYDNIFPSFLEKG 349
            |                      |.|:                        :...||.|      
  Rat   212 G----------------------YSPE------------------------LLQSNILP------ 224

  Fly   350 QFISYGKSAIDIENTSGESYNQIMADITTSFTLLIGIFFPSVTGIMAGSNRSGDLADAQKSIPIG 414
                        |.:.|||:          || :.|:|||:.||:|||.|..|||.:...|||:|
  Rat   225 ------------EYSPGESF----------FT-VFGVFFPAATGVMAGFNMGGDLREPADSIPLG 266

  Fly   415 TICAILTTSTVYLSSVMFFAGTVDNLLLRDKFGQSIGGKLVVANIAWPNQWVILIGSFLSTLGAG 479
            ::.|:..:..:|:..............||..|       |:...::... ::.|:|.::|:|.:.
  Rat   267 SLAAVGISWFLYIIFAFLLGAVCTREALRSDF-------LIAEKVSLVG-FLFLLGLYISSLASC 323

  Fly   480 LQSLTGAPRLLQAIARDEIIPFLAPFAKSSK--RGEPTRALLLTIVICQCGILLGNVDLLAPLLS 542
            :..|.||||:||.||:|::||.|| |..:.|  ...|..|:.||.::....:|:|.|::|||:::
  Rat   324 MGGLYGAPRILQCIAQDKVIPALA-FLGNGKGPNKTPVAAICLTSLVTMAFVLVGQVNVLAPVVT 387

  Fly   543 MFFLMC-----YGFVNLACAVQTLLRTPNWRPR 570
            :.|::.     |.:..|:.|...|.::|...||
  Rat   388 INFMLTYIAVDYSYFALSMAHCGLAQSPEPMPR 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kccNP_001286795.1 2a30 49..1077 CDD:273347 135/488 (28%)
SLC12 674..1077 CDD:281515
Slc12a8NP_705889.2 2a30 34..>420 CDD:273347 133/486 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2083
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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