DRSC/TRiP Functional Genomics Resources

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Protein Alignment kcc and Slc12a1

DIOPT Version :9

Sequence 1:NP_001286795.1 Gene:kcc / 37800 FlyBaseID:FBgn0261794 Length:1077 Species:Drosophila melanogaster
Sequence 2:NP_001257546.1 Gene:Slc12a1 / 25065 RGDID:3685 Length:1095 Species:Rattus norvegicus


Alignment Length:1217 Identity:311/1217 - (25%)
Similarity:493/1217 - (40%) Gaps:370/1217 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 EENQKSSIDPNLYLYDDDLETRPHISTF-------ISSIANYENT-------------------- 76
            :..:.:..|...:.||....|. ::.||       :..|..|.||                    
  Rat    71 QTGETAKTDTTFHAYDSHTNTY-YLQTFGHNTMDAVPKIEYYRNTGSVSGPKVNRPSLQEIHEQL 134

  Fly    77 ------IPAATD----PDAKPAAPSA-----------RMGTLIGVFLPCIQNIFGVILFIRLTWV 120
                  .|.:.|    .|..|....|           :.|.:.||.:.|:.||:||:|||||:|:
  Rat   135 AKNVAVAPGSADRVANGDGMPGDEQAENKEEDVTGVVKFGWVKGVLVRCMLNIWGVMLFIRLSWI 199

  Fly   121 VGTAGAVCGFLIVLTCCCVTMLTAISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGMLFYTGT 185
            ||.||...|.||:|....||.:|.:|.|||||||.|..||:|::|||||||||||::|::|....
  Rat   200 VGEAGIGLGVLIILLSTMVTSITGLSTSAIATNGFVRGGGAYYLISRSLGPEFGGSIGLIFAFAN 264

  Fly   186 TLAAAMYIVGAVEIVLTYMAPWASIFGDFTKDADAMY----NNFRVYGTLLLIFMGLIVFLGVKF 246
            .:|.|||:||..|.|:           |..|::|:|.    |:.|:.|::.::.:..|...|:::
  Rat   265 AVAVAMYVVGFAETVV-----------DLLKESDSMMVDPTNDIRIIGSITVVILLGISVAGMEW 318

  Fly   247 VNKFATVALACVILSIIAVYVGIFDNIHGNEKLYMCVLGKRLLKDIPLENCTKEDSFLRDIYCPD 311
            ..|...:.|..::::|...::|..                     ||                  
  Rat   319 EAKAQVILLVILLIAIANFFIGTV---------------------IP------------------ 344

  Fly   312 GKCEEYYLANNVTKVKGIKGLASGVFYDNIFPSFLEKGQFISYGKSAIDIENTSGESYNQIMADI 376
                    :||..|.:|.....:.:|.:|..|||                  |.||.:..:.|  
  Rat   345 --------SNNEKKSRGFFNYQASIFAENFGPSF------------------TEGEGFFSVFA-- 381

  Fly   377 TTSFTLLIGIFFPSVTGIMAGSNRSGDLADAQKSIPIGTICAILTTSTVYLSSVMFFAGTVDNLL 441
                     ||||:.|||:||:|.||||.|.|.:||.||:.||..|:..|:...:..|..|    
  Rat   382 ---------IFFPAATGILAGANISGDLEDPQDAIPRGTMLAIFITTVAYIGVAICVAACV---- 433

  Fly   442 LRDKFGQS----IGGKLVVANIAW------------PNQW-----------------VILIGSFL 473
            :||..|..    :.|.....:.|.            |.|:                 :|..|.|.
  Rat   434 VRDATGSMNDTVVSGMNCNGSAACGLGYDFSRCQHEPCQYGLMNNFQVMSMVSGFGPLITAGIFS 498

  Fly   474 STLGAGLQSLTGAPRLLQAIARDEIIPFLAPFAKS-SKRGEPTRALLLTIVICQCGILLGNVDLL 537
            :||.:.|.||..||::.||:.:|.|...|..|||. .|..||.|...||.||....||:..::::
  Rat   499 ATLSSALASLVSAPKVFQALCKDNIFKGLQFFAKGYGKNNEPLRGYFLTFVIAMAFILIAELNVI 563

  Fly   538 APLLSMFFLMCYGFVNLACAVQTLLRTPNWRPRFKFYHWSLSLIGLTLCISVMIMTSWYFALIAM 602
            ||::|.|||..|..:|.:|...:..::|.|||.:..|:..:||.|..||.:||.:.:|:.|:|..
  Rat   564 APIISNFFLASYALINFSCFHASYAKSPGWRPAYGIYNMWVSLFGAILCCAVMFVINWWAAVITY 628

  Fly   603 GMAIIIYKYIEYRGAEKEWGDGIRGMALTAARYSLLRLEEGPPHTKNWRPQILVLSKLNDNLLPK 667
            .:.:.:|.|:.|:..:..||...:.::..:|..:.|.|.....|.||:|||.:||:.     .|.
  Rat   629 VIELFLYIYVTYKKPDVNWGSSTQALSYVSALDNALELTTVEDHVKNFRPQCIVLTG-----GPM 688

  Fly   668 YR-KIFSFATQLKAGKGLTICVSVIKGDHTKITNKAVDAKATLRKYMTDEKVKGFCDVLVAQQIG 731
            .| .:...........||.||..|..|.......:.....|..:.::...|:|.|...:.|....
  Rat   689 TRPALLDITHAFTKNSGLCICCEVFVGPRKLCVKEMNSGMAKKQAWLMKNKIKAFYAAVAADCFR 753

  Fly   732 EGLSSVIQTIGLGGMKPNTVIIGWPYSWR------------------------------------ 760
            :|:.|::|..|||.|||||::||:..:||                                    
  Rat   754 DGVRSLLQASGLGRMKPNTLVIGYKKNWRKAPLSELENYVGIIHDAFDFEIGVVIVRISQGFDIS 818

  Fly   761 ----------------------------QEGRNSWKTFIQ----------------TVRTVAACH 781
                                        :||:...:...:                .:.|:.:.|
  Rat   819 PVLQVQDELEKLEQERLALEAAIKDNDCEEGKGGIRGLFKKAGKLNITKPAPKKDSNISTIQSMH 883

  Fly   782 MALMVPKGINFYPESNHKIG-GNIDIWWIVHDGGLLMLLPFLLKQHRTWRNCKLRIFT---VAQI 842
            :.....|.:....:...|.| |.||:||:..||||.:|:|::|...:.|::|||||:.   :.:|
  Rat   884 VGEFNQKLVEASAQFKKKQGKGTIDVWWLFDDGGLTLLIPYILTLRKKWKDCKLRIYVGGKINRI 948

  Fly   843 EDNSIQMKKDLKTFLYHLRIE-ADVEVVEMNNSDISAYTYERTLMMEQRNQMLRALGLNKKENSK 906
            |:..|.|...|..|    ||: ||:.::    .||:...                    .||:.|
  Rat   949 EEEKISMASLLSKF----RIKFADIHII----GDINIKP--------------------NKESWK 985

  Fly   907 VVQTIMD-YKETPSDNKMSLVQTIVDHHYDATKTASKVRFADPTIEETQHHDSQNDEKRNSIDLD 970
            |.:.::: |:             :.:.|.|.| ||.|:                   ||.|    
  Rat   986 VFEEMIEPYR-------------LHESHKDLT-TAEKL-------------------KRES---- 1013

  Fly   971 GPENADTPETTSNKDESTEKADGDFKSSVKPDEFNVRRMHTAIKLNEVIVEKSQDAQLVIMNLPG 1035
             |......|..:.|::|                      :..::|||::.|.|:.|.|::::|| 
  Rat  1014 -PWKITDAELEAVKEKS----------------------YRQVRLNELLQEHSRAANLIVLSLP- 1054

  Fly  1036 PPREVRAERERN-----YMEFLEVLTEGLEKVLMVRGGGREVITIYS 1077
                  ..|:.:     ||.:||:||:.|..||:|||..:.|:|.||
  Rat  1055 ------VARKGSISDLLYMAWLEILTKNLPPVLLVRGNHKNVLTFYS 1095

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kccNP_001286795.1 2a30 49..1077 CDD:273347 308/1205 (26%)
SLC12 674..1077 CDD:281515 105/493 (21%)
Slc12a1NP_001257546.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 26..45
AA_permease_N 86..152 CDD:285588 10/66 (15%)
2a30 100..1095 CDD:273347 303/1185 (26%)
SLC12 690..1095 CDD:281515 106/499 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352224
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2083
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57166
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.750

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