DRSC/TRiP Functional Genomics Resources

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Protein Alignment kcc and Slc12a9

DIOPT Version :10

Sequence 1:NP_001286795.1 Gene:kcc / 37800 FlyBaseID:FBgn0261794 Length:1077 Species:Drosophila melanogaster
Sequence 2:NP_599232.2 Gene:Slc12a9 / 171443 RGDID:620747 Length:914 Species:Rattus norvegicus


Alignment Length:865 Identity:235/865 - (27%)
Similarity:382/865 - (44%) Gaps:179/865 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 APSARMGTLIGVFLPCIQNIFGVILFIRLTWVVGTAGAVCGFLIVLTCCCVTMLTAISMSAIATN 153
            |.:.::.|.:||.:|.:.::|.:::|:|:.:|||.||.:....::|....:..||.:|:.|||||
  Rat    32 ASARKLSTFLGVVVPTVLSMFSIVVFLRIGFVVGHAGLLQALAMLLVAYVILALTVLSVCAIATN 96

  Fly   154 GVVPAGGSYFMISRSLGPEFGGAVGMLFYTGTTLAAAMYIVGAVEIVLTYMAPWASIFG-DFT-- 215
            |.|..||:||||||:||||.||::|::||.......|:.::|.||.:|       .:|| |.|  
  Rat    97 GAVRGGGAYFMISRTLGPEVGGSIGLMFYLANVCGCAVSLLGLVESIL-------DVFGADVTGS 154

  Fly   216 ---KDADAMYNNFRVYGTLLLIFMGLIVFLGVKFVNK--FATV-----ALACVILSIIAVYVGIF 270
               |.....|....:||:|||..:|.:..||.....:  |.|.     :||.|::|.:||     
  Rat   155 SGIKVLPQGYGWNLLYGSLLLGLVGGVCALGAGLYARASFLTFLLVSGSLASVLVSFVAV----- 214

  Fly   271 DNIHGNEKLYMCVLGKRLLKDIPLENCTKEDSFLRDIYCPDGKCEEYYLANNVTKV--KGIKGLA 333
                          |.|                                  |:|..  .|..|  
  Rat   215 --------------GPR----------------------------------NITLAPRPGTNG-- 229

  Fly   334 SGVFYDNIFPSFLEKGQFISYGKSAIDIENTSGESYNQIMADITT----SFTLLIGIFFPSVTGI 394
                 .::.|   ..|.|..:..|.  :::..|..|.:   |.||    :|..:..:.|...|||
  Rat   230 -----SSVPP---RHGHFTGFNGST--LKDNLGAGYAE---DYTTGAMMTFASVFAVLFNGCTGI 281

  Fly   395 MAGSNRSGDLADAQKSIPIGTICAILTTSTVYLSSVMFFAG--TVDNLLLRDKFG--QSIGGKLV 455
            |||:|.||:|.|..::||:|||.|:..|..:|:  ::||..  |.|..||:..:|  :.|.    
  Rat   282 MAGANMSGELKDPSRAIPLGTIIAVAYTFFIYI--LLFFLSSFTCDRALLQGDYGFFRDIS---- 340

  Fly   456 VANIAWPNQWVILIGSFLSTLGAGLQSLTGAPRLLQAIARDEII-PFLAPFAKSSKRGEPTRALL 519
                .||.  ::|||.:.:.|.|.:.||.||.|:|.|:|:|::. ..|||....|..|.|..|:|
  Rat   341 ----LWPP--LVLIGIYATALSASMSSLIGASRILHALAQDDLFGVILAPAKVVSGGGNPWGAVL 399

  Fly   520 LTIVICQCGILLGNVDLLAPLLSMFFLMCYGFVNLACAVQTLLRTPNWRPRFKFYHWSLSLIGLT 584
            .:..:.|..:|.|.::.||.::::|:|:.|..|:|:|........||:||.|..:.|...|:|:.
  Rat   400 YSWGLVQLVLLAGKLNTLAAVVTVFYLVAYAAVDLSCLSLEWASAPNFRPTFSLFSWHTCLLGVA 464

  Fly   585 LCISVMIMTSWYFA---LIAMGMAIIIYKYIEYRGAEKEWGDGIRGMALTAARYSLLRLEEGPPH 646
            .|:.:|.:.|...|   |:.||   ::...:..||....||...:.:.....|..||||:....|
  Rat   465 SCLLMMFLISPGAAGGSLLLMG---LLSALLTARGGPSSWGYVSQALLFHQVRKYLLRLDVRKEH 526

  Fly   647 TKNWRPQILVLSKLNDNLLPKYRKIFSFATQLKAGKGLTICVSVIKGDHTKITNKAVDAKATLRK 711
            .|.||||:|:|.......||..|    .|.|||.| ||.:...|..||...:.:..|..:.....
  Rat   527 VKFWRPQLLLLVGNPRGALPLLR----LANQLKKG-GLYVLGHVTLGDLDSLPSDPVQPQYGAWL 586

  Fly   712 YMTD-EKVKGFCDVLVAQQIGEGLSSVIQTIGLGGMKPNTVIIGW------------------PY 757
            .:.| .:||.|.|:.::..:.:|...:::..|||||||||:::|:                  |.
  Rat   587 SLVDLAQVKAFVDLTLSPSVRQGAQHLLRISGLGGMKPNTLVLGFYDDAPPQDHFLTDPAFSEPA 651

  Fly   758 SWRQEGRN-------------------SWKTFIQTVRTVAACHMALMVPKGINFYPESNHKIGG- 802
            ...:||.:                   |.:.::.||......:..:::.:.....|......|. 
  Rat   652 EGTREGGSPALSTLFPPPRAPGSPRALSPQDYVATVADALKMNKNVVLARACGALPPERLSRGSG 716

  Fly   803 ------NIDIW------------WIVHDGGLLMLLPFLLKQHRTWRNCKLRIFTVAQIEDNSIQM 849
                  ::|:|            ::...|..|:.:..:|.....|.:.:||||......:.....
  Rat   717 SSAQLHHVDVWPLNLLRPRGGPGYVDVCGLFLLQMATILSMVPAWHSARLRIFLCLGPREAPGAA 781

  Fly   850 KKDLKTFLYHLRIEADVEVV 869
            :..|:..|..|||.|:|:.|
  Rat   782 EGRLRALLSQLRIRAEVQEV 801

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kccNP_001286795.1 AA_permease_2 49..1077 CDD:459263 235/865 (27%)
Slc12a9NP_599232.2 AA_permease_2 36..905 CDD:459263 234/861 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 645..678 3/32 (9%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 843..864
Blue background indicates that the domain is not in the aligned region.

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