DRSC/TRiP Functional Genomics Resources

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Protein Alignment kcc and Slc12a8

DIOPT Version :9

Sequence 1:NP_001286795.1 Gene:kcc / 37800 FlyBaseID:FBgn0261794 Length:1077 Species:Drosophila melanogaster
Sequence 2:NP_001357928.1 Gene:Slc12a8 / 171286 MGIID:2443672 Length:705 Species:Mus musculus


Alignment Length:487 Identity:136/487 - (27%)
Similarity:217/487 - (44%) Gaps:116/487 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 GTLIGVFLPCIQNIFGVILFIRLTWVVGTAGAVCGFLIVLTCCCVTMLTAISMSAIATNGVVPAG 159
            ||..|||..|:.|||||:||:|..|:||..|.:.|.|:|.....|.::|.:|...:|.:|.:.:|
Mouse    39 GTWDGVFTSCMINIFGVVLFLRTGWLVGNTGVLLGLLLVSFVVLVALITVLSGIGVAEHGGISSG 103

  Fly   160 GSYFMISRSLGPEFGGAVGMLFYTGTTLAAAMYIVGAVEIVLTYMAPWASIFGDFTKDADAMYNN 224
            |.|.|||..||.:.||.||:|:..|..:|.||||.|..|.:...:.     .||.          
Mouse   104 GVYSMISSVLGGQMGGTVGLLYVFGQCVAGAMYITGFAESISDLLG-----LGDI---------- 153

  Fly   225 FRVYGTLLLIFMGL--IVFLGVKFVNKFATVALACVILSIIAVYVGIFDNI---HGNEKLYMCVL 284
            :.|.|..:.:.:.|  |...|||::.:...:.|..:.:|.:...||.|.::   ||       .:
Mouse   154 WAVRGISVAVLLALLGINLAGVKWIIRLQLLLLLLLAVSTLDFVVGSFTHLDPEHG-------FI 211

  Fly   285 GKRLLKDIPLENCTKEDSFLRDIYCPDGKCEEYYLANNVTKVKGIKGLASGVFYDNIFPSFLEKG 349
            |                      |.|:                        :...||.|      
Mouse   212 G----------------------YSPE------------------------LLQSNILP------ 224

  Fly   350 QFISYGKSAIDIENTSGESYNQIMADITTSFTLLIGIFFPSVTGIMAGSNRSGDLADAQKSIPIG 414
                        |.:.|||:          || :.|:|||:.||:|||.|..|||.|...|:|:|
Mouse   225 ------------EYSPGESF----------FT-VFGVFFPAATGVMAGFNMGGDLRDPADSVPLG 266

  Fly   415 TICAILTTSTVYLSSVMFFAGTVDNLLLRDKFGQSIGGKLVVANIAWPNQWVILIGSFLSTLGAG 479
            ::.|:..:..:|:..............||..|       |:...::... ::.|:|.::|:|.:.
Mouse   267 SLAAVGVSWFLYIIFAFLLGAVCTREALRSDF-------LIAEKVSLVG-FLFLLGLYISSLASC 323

  Fly   480 LQSLTGAPRLLQAIARDEIIPFLAPFAKSSKRGE-PTRALLLTIVICQCGILLGNVDLLAPLLSM 543
            :..|.||||:||.||:|::||.||..|......: |..|:.||.::....:|:|.|::|||::::
Mouse   324 MGGLYGAPRILQCIAQDKVIPALAFLANGKGPNKTPVAAICLTSLVTMAFVLVGQVNVLAPVVTI 388

  Fly   544 FFLMCYGFVN-----LACAVQTLLRTPNWRPR 570
            .|::.|..|:     |:.|...|..:|...||
Mouse   389 NFMLTYIMVDYSYFALSMAHCGLAPSPEPVPR 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kccNP_001286795.1 2a30 49..1077 CDD:273347 136/487 (28%)
SLC12 674..1077 CDD:281515
Slc12a8NP_001357928.1 2a30 34..>420 CDD:273347 134/485 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 472..512
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2083
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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