DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kcc and slc12a4

DIOPT Version :9

Sequence 1:NP_001286795.1 Gene:kcc / 37800 FlyBaseID:FBgn0261794 Length:1077 Species:Drosophila melanogaster
Sequence 2:XP_002942716.1 Gene:slc12a4 / 100493471 XenbaseID:XB-GENE-1014107 Length:1090 Species:Xenopus tropicalis


Alignment Length:1104 Identity:600/1104 - (54%)
Similarity:794/1104 - (71%) Gaps:76/1104 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NSAKDDSDEMEIIPSEHNGTVHETKNEDSGDIHRAEENQKSSI-DPNLYLYDDDLETRPHISTFI 67
            :|::|..|.   :.|:.:|..    .|:|..:..:|.|:.:.. |.||.|::::|:.||.:|:|:
 Frog    33 HSSRDPYDS---VSSDGHGNY----KENSPFLTGSEANKGNQFYDKNLALFEEELDIRPKVSSFL 90

  Fly    68 SSIANYENTIPAATDPDAKPAA-----PSARMGTLIGVFLPCIQNIFGVILFIRLTWVVGTAGAV 127
            |.:.||.|....|.:.:....|     .|..|||::||:|||:|||.|||||:||||:|||.|.:
 Frog    91 SRLVNYTNLTQGAKEHEEAEEARRKVNKSPCMGTVMGVYLPCMQNILGVILFLRLTWIVGTGGVL 155

  Fly   128 CGFLIVLTCCCVTMLTAISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGMLFYTGTTLAAAMY 192
            ...||.|.|||.|:|||||||||||||||||||||||||||||||||||||:.||.|||.|.|||
 Frog   156 QTLLITLICCCCTLLTAISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGLCFYLGTTFAGAMY 220

  Fly   193 IVGAVEIVLTYMAPWASIF--GDFTKDADAMYNNFRVYGTLLLIFMGLIVFLGVKFVNKFATVAL 255
            |:||:||:|.|:.|.|:||  .:..:|:.|..||.|||||:.|..|.:|||:|||:|||||::.|
 Frog   221 ILGAIEILLMYIVPEAAIFHSPNTHEDSSAKLNNMRVYGTVFLTLMAIIVFVGVKYVNKFASLFL 285

  Fly   256 ACVILSIIAVYVGIFDNIHGNEKLYMCVLGKRLL---------KDIPLENCTKEDSFLRDIYC-- 309
            ||||:||:::|.|...:|.......:|:||.|.|         |.|.|:|.||..: |.:.:|  
 Frog   286 ACVIISILSIYAGSIKSIFDPPVFPICMLGNRTLSRDRFEICAKTIILDNVTKPTT-LWEQFCGS 349

  Fly   310 ---PDGKCEEYYLANNVTKVKGIKGLASGVFYDNIFPSFLEKGQFISYGK-SAIDIENTSGESYN 370
               ....|::|:|.||||::.||.|.|||:..||::.::|:||:.:...: |::|...:....:.
 Frog   350 SNFSTSSCDQYFLKNNVTEIAGIPGAASGILKDNLWSNYLQKGEILEKSQLSSVDELGSKSNLHL 414

  Fly   371 QIMADITTSFTLLIGIFFPSVTGIMAGSNRSGDLADAQKSIPIGTICAILTTSTVYLSSVMFFAG 435
            .::.||:.:||:|:||||||||||||||||||||.|||||||:|||.||:|||.:|.|:|:.|..
 Frog   415 YVLTDISATFTVLVGIFFPSVTGIMAGSNRSGDLRDAQKSIPVGTILAIITTSFIYFSTVVLFGA 479

  Fly   436 TVDNLLLRDKFGQSIGGKLVVANIAWPNQWVILIGSFLSTLGAGLQSLTGAPRLLQAIARDEIIP 500
            .::.::||||:|.::...|||..::||:.|||:||||.||.||||||||||||||||||.|.|||
 Frog   480 CIEGVVLRDKYGDAVNKNLVVGTLSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIANDNIIP 544

  Fly   501 FLAPFAKSSKRGEPTRALLLTIVICQCGILLGNVDLLAPLLSMFFLMCYGFVNLACAVQTLLRTP 565
            ||..|.:....||||.|||||..|.:.|||:.::|::||:|||||||||.|||||||||||||||
 Frog   545 FLRVFGQGKVNGEPTWALLLTAFIAELGILIASLDMVAPILSMFFLMCYLFVNLACAVQTLLRTP 609

  Fly   566 NWRPRFKFYHWSLSLIGLTLCISVMIMTSWYFALIAMGMAIIIYKYIEYRGAEKEWGDGIRGMAL 630
            |||||||:|||:||..|:::|:::|.:.|||:|||||.:|.:|||||||:||||||||||||::|
 Frog   610 NWRPRFKYYHWALSFFGMSICLALMFVCSWYYALIAMLIAGMIYKYIEYQGAEKEWGDGIRGLSL 674

  Fly   631 TAARYSLLRLEEGPPHTKNWRPQILVLSKLNDNLLPKYRKIFSFATQLKAGKGLTICVSVIKGDH 695
            :||||:|||||||||||||||||:|||.||:::|..||.::.:|::||||||||||..:.::|:.
 Frog   675 SAARYALLRLEEGPPHTKNWRPQLLVLLKLDEDLHVKYPRLLTFSSQLKAGKGLTIIGTTLQGNF 739

  Fly   696 TKITNKAVDAKATLRKYMTDEKVKGFCDVLVAQQIGEGLSSVIQTIGLGGMKPNTVIIGWPYSWR 760
            .:...:...|:.|::..|..||||||..|:|:.::.:|:|.:||:.||||||.|||::||||.||
 Frog   740 LESYGEVQAAEQTIKNMMEIEKVKGFSQVVVSSEVCDGISHLIQSCGLGGMKHNTVLLGWPYGWR 804

  Fly   761 Q-EGRNSWKTFIQTVRTVAACHMALMVPKGINFYPESNHK--IGGNIDIWWIVHDGGLLMLLPFL 822
            | |...||||||..||...|..:||||||.::||| |||:  :.||||:||||||||:|||||||
 Frog   805 QSEDPRSWKTFIDAVRCTTAARLALMVPKNVSFYP-SNHERYLEGNIDVWWIVHDGGMLMLLPFL 868

  Fly   823 LKQHRTWRNCKLRIFTVAQIEDNSIQMKKDLKTFLYHLRIEADVEVVEMNNSDISAYTYERTLMM 887
            ||||:.|:.||:|||||||::||||||||||.|||||||:||:||||||:|||||||||||||||
 Frog   869 LKQHKVWKKCKMRIFTVAQLDDNSIQMKKDLATFLYHLRLEAEVEVVEMHNSDISAYTYERTLMM 933

  Fly   888 EQRNQMLRALGLNKKENSKVVQTIMDYKETPSDNKMSLVQTIVDHHYDATKTASKVRFADPTIEE 952
            |||:||||.:.|.|.|..:..|.:.|        :.|::.  |:.:|      |.....:|.:|.
 Frog   934 EQRSQMLRQMRLTKTERDREAQLVKD--------RNSIIP--VESYY------SDEEDEEPELEL 982

  Fly   953 TQHHDSQNDEKRNSIDLDGPENADTPETTSNKDEST----EKADGDFKSSVKPDEFNVRRMHTAI 1013
            .:.|.:...:|.|:             ...|::..|    |.||      :|||:.||||||||:
 Frog   983 AKIHMTWTKDKYNA-------------QWKNRNNETMHFRELAD------IKPDQSNVRRMHTAV 1028

  Fly  1014 KLNEVIVEKSQDAQLVIMNLPGPPREVRAERERNYMEFLEVLTEGLEKVLMVRGGGREVITIYS 1077
            |||||||.:|.||:||::|:||||:  ..:.:.||||||||||||||:||:|||||||||||||
 Frog  1029 KLNEVIVTRSHDAKLVLLNMPGPPK--NTDGDENYMEFLEVLTEGLERVLLVRGGGREVITIYS 1090

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kccNP_001286795.1 2a30 49..1077 CDD:273347 588/1056 (56%)
SLC12 674..1077 CDD:281515 219/409 (54%)
slc12a4XP_002942716.1 2a30 49..1090 CDD:273347 593/1083 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 429 1.000 Domainoid score I592
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H21056
Inparanoid 1 1.050 1154 1.000 Inparanoid score I208
OMA 1 1.010 - - QHG57166
OrthoDB 1 1.010 - - D110005at33208
OrthoFinder 1 1.000 - - FOG0000627
OrthoInspector 1 1.000 - - otm48284
Panther 1 1.100 - - LDO PTHR11827
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X451
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

Return to query results.
Submit another query.