DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kcc and slc12a1

DIOPT Version :9

Sequence 1:NP_001286795.1 Gene:kcc / 37800 FlyBaseID:FBgn0261794 Length:1077 Species:Drosophila melanogaster
Sequence 2:XP_021323409.1 Gene:slc12a1 / 100329975 ZFINID:ZDB-GENE-080130-3 Length:1037 Species:Danio rerio


Alignment Length:1229 Identity:319/1229 - (25%)
Similarity:506/1229 - (41%) Gaps:355/1229 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SAKDDSDEME--------------------IIPSEHNGTVHETKNED--------SGDIHRAEEN 41
            ::|||..:.|                    ::.:..:.|:....|.|        ||  |||   
Zfish     8 TSKDDPPQYEETSFCTNGFGNGERRAIRSSVVSAFGHDTLDRVPNPDFYRNAASISG--HRA--- 67

  Fly    42 QKSSIDPNLY-LYD-----------DDLETRPHISTFISSIANYENTIPAATDPDAKPAAPSARM 94
                :.|:|: |:|           ..:|....:.:  |::.:.|:..|.    :.|......:.
Zfish    68 ----VRPSLHELHDVFQKNGGLNLPSPVEDSEGVDS--STLGDVESVTPL----EEKDTGGVVKF 122

  Fly    95 GTLIGVFLPCIQNIFGVILFIRLTWVVGTAGAVCGFLIVLTCCCVTMLTAISMSAIATNGVVPAG 159
            |.:.||.:.|:.||:||:|||||:||.|.||...|.::||....||.:|.:|||||.|||||..|
Zfish   123 GWIKGVLVRCMLNIWGVMLFIRLSWVFGQAGIGLGIVVVLLSMVVTSVTCLSMSAICTNGVVRGG 187

  Fly   160 GSYFMISRSLGPEFGGAVGMLFYTGTTLAAAMYIVGAVEIVLTYMAPWASIFGDFTKDADAMY-- 222
            |:|::|||||||||||::|::|.....:|.|||:||..|.|:           :..||::|:.  
Zfish   188 GAYYLISRSLGPEFGGSIGLIFAFANAVAVAMYVVGFAETVV-----------ELLKDSNALIVD 241

  Fly   223 --NNFRVYGTLLLIFMGLIVFLGVKFVNKFATVALACVILSIIA-VYVGIFDNIHGNEKLYMCVL 284
              |:.|:.|.:.::.:..|...|:::..| |.|||..::|..|| |:||..              
Zfish   242 PTNDIRIIGCITVVLLMGITVAGMEWEAK-AQVALLVILLVAIANVFVGTV-------------- 291

  Fly   285 GKRLLKDIPLENCTKEDSFLRDIYCPDGKCEEYYLANNVTKVKGIKGLASGVFYDNIFPSFLEKG 349
                   ||    :.:|.                      :.||.......:..:|..|.|.:  
Zfish   292 -------IP----STQDK----------------------RSKGFFNYHESIAKENFIPDFRD-- 321

  Fly   350 QFISYGKSAIDIENTSGESYNQIMADITTSFTLLIGIFFPSVTGIMAGSNRSGDLADAQKSIPIG 414
                            ||::..:.|           ||||:.|||:||:|.||||.|.|.::|.|
Zfish   322 ----------------GETFFSVFA-----------IFFPAATGILAGANISGDLRDPQGALPKG 359

  Fly   415 TICAILTTSTVYLSSVMFFAGTVDNLLLRDKFGQ-----SIGG-----------------KLVVA 457
            |:.||..|...||...:..:.||    :||..|.     ..|.                 :....
Zfish   360 TLLAIFITGVTYLGIALVVSVTV----VRDATGNRNDTIQAGASCNFSSACDFGYDFSICQTTKC 420

  Fly   458 NIAWPNQW-----------VILIGSFLSTLGAGLQSLTGAPRLLQAIARDEIIPFLAPFAKS-SK 510
            |....|.:           :|..|:|.:||.:.|.||..||::.||:.:|.|...|..|||. .|
Zfish   421 NYGLMNNFQVMTLVSGFGPLITAGTFSATLSSALASLVSAPKVFQALCKDNIYKALKFFAKGHGK 485

  Fly   511 RGEPTRALLLTIVICQCGILLGNVDLLAPLLSMFFLMCYGFVNLACAVQTLLRTPNWRPRFKFYH 575
            ..||.|..:||.:|....||:..::.:||::|.|||..|..:|.:|...:..::|.|||.:|:|:
Zfish   486 NNEPIRGYVLTFIIAVAFILIAQLNTIAPIISNFFLASYALINYSCFHASYAKSPGWRPAYKYYN 550

  Fly   576 WSLSLIGLTLCISVMIMTSWYFALIAMGMAIIIYKYIEYRGAEKEWGDGIRGMALTAARYSLLRL 640
            ..|||.|..||.:||.:.:|:.||:..|:...:|.|:..:..:..||...:.:....|..:.|.|
Zfish   551 MWLSLFGAVLCCAVMFVINWWAALLTYGIEFFLYIYVTVKKPDVNWGSSTQAVTFINAVNNALIL 615

  Fly   641 EEGPPHTKNWRPQILVLSKLNDNLLPKYR-KIFSFATQLKAGKGLTICVSVIKGDHTKITNKAVD 704
            .....|.||:||:.|||:.     .|:.| .:...:.......||.:...|..|...|.....::
Zfish   616 SGVDDHIKNFRPKCLVLTG-----SPRSRPALLDLSHSFTKNYGLCLTCEVFVGSRDKNLQDMIE 675

  Fly   705 AKATLRKYMTDEKVKGFCDVLVAQQIGEGLSSVIQTIGLGGMKPNTVIIGWPYSWR----QEGRN 765
            .....:.::..:|.|.|...:.:..:.:|..:::|..|||.||||||::|:...||    |:.:|
Zfish   676 GDVQNQLWLNKQKHKAFYTPIASDTLRDGAQALMQASGLGRMKPNTVMLGFKRDWRTSKPQDVQN 740

  Fly   766 ----SWKTFIQTVRTV---------------AACHMALMV----------------PKGINFY-- 793
                ...||...:.||               |...|..|:                |:|  |:  
Zfish   741 YVGILHDTFDFELGTVIMRVSQGMDISHILKAEEEMERMILEQQALEMEENDFQPGPRG--FFNR 803

  Fly   794 --------PESNHKIG---------------------------GNIDIWWIVHDGGLLMLLPFLL 823
                    |.|...:|                           ||||:||:..||||.:|||.:|
Zfish   804 AKKTPKKEPTSKVSLGVPQASDLAKLNQRLVEASGQFKQQQGKGNIDVWWLFDDGGLTLLLPHIL 868

  Fly   824 KQHRTWRNCKLRIFTVAQIEDNSIQMKKDLKTFLYHLRIEADVEVVEMNNSDISAYTYERTLMME 888
            ...:.||.|:||||...|.|                 ||:.|.|.:::                 
Zfish   869 TTRKKWRECRLRIFIAGQPE-----------------RIQQDKEEMQL----------------- 899

  Fly   889 QRNQMLRALGLNKKENSKVVQTIMDYKETPSDNKMSLVQTIVDHHYDATKTASKVRFADPTIEET 953
                :|:...: |.|:.||   |.|....||.....|.:.:                    ||..
Zfish   900 ----LLKKFRI-KCEDIKV---ISDLNIRPSAENWKLFEDM--------------------IEPF 936

  Fly   954 QHHDSQNDEKRNSIDLDGPENADTPETTSNKDESTEKADGDFKSSVKPDEFNVRRMHTAIKLNEV 1018
            :.|:...|..:..              ...|::..:..|.:.      |.|..:.| ..::|||:
Zfish   937 RLHEGSKDSSQTE--------------ALRKEQPWKITDAEL------DAFEQKTM-LQVRLNEL 980

  Fly  1019 IVEKSQDAQLVIMNLPGPPREVRAERERNYMEFLEVLTEGLEKVLMVRGGGREVITIYS 1077
            :.|.|:.|:|::::||...:  .:..:..||.:||.||:.|...|::||..:.|:||||
Zfish   981 LQESSRAAKLIVVSLPIARK--GSVSDHLYMAWLEALTKNLPPTLLIRGNHKSVLTIYS 1037

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kccNP_001286795.1 2a30 49..1077 CDD:273347 304/1155 (26%)
SLC12 674..1077 CDD:281515 105/478 (22%)
slc12a1XP_021323409.1 2a30 45..1037 CDD:273347 313/1190 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57166
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000627
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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