DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nap1 and RGD1560617

DIOPT Version :9

Sequence 1:NP_001246485.1 Gene:Nap1 / 37798 FlyBaseID:FBgn0015268 Length:370 Species:Drosophila melanogaster
Sequence 2:XP_038936256.1 Gene:RGD1560617 / 300135 RGDID:1560617 Length:384 Species:Rattus norvegicus


Alignment Length:373 Identity:168/373 - (45%)
Similarity:227/373 - (60%) Gaps:46/373 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDAPAEGHVDP--ESCNEIEDEKSGSDCQSMPAYMNSVMRRQYLQQMV----------------- 46
            :|...|..:|.  |...::|:|::|.:        ..|..||...||:                 
  Rat     4 IDNKKESELDQDLEDVEKVEEEETGEE--------TKVKARQLTVQMMQNPQILAALQARLGSRV 60

  Fly    47 -------KMLPAPVQNRIVFLKNLQLQHLNIEAQFFEDVYKLEQKYQVQYQPLFDKRREIIEGKV 104
                   :.||..|:.|:..||||.::...|||:|.|||:.||:||.|..|||||||.|||....
  Rat    61 DTPTGYTESLPKVVKRRVNALKNLLVKCAQIEAKFDEDVHDLERKYAVLCQPLFDKRFEIINAIY 125

  Fly   105 DPAEEKPQWKEPESSTDNEADAEHFREAL--SSLKSIPK-DAKGIPGFWLTVFRNTAIMSEMVQP 166
            :|.||:.:||..|   ::|...|...:|:  ...|...| |.||||.||||.|:|..::|:|||.
  Rat   126 EPTEEECEWKPDE---EDEVSEELKEKAMIEDEKKDEEKEDPKGIPEFWLTDFKNVDLLSDMVQE 187

  Fly   167 HDEPAIRKLIDISIKY-DNGH--SYTLEFHFDKNEYFSNSVLTKQYVLKSTVDPNDPFAFEGPEI 228
            ||||.::.|.|..:|: |.|.  |:.|||||:.||||:|.:|||.|.::|..|.:||.:|:||||
  Rat   188 HDEPILKPLKDTKVKFSDPGQPISFILEFHFEPNEYFTNEMLTKTYRMRSEPDDSDPLSFDGPEI 252

  Fly   229 YKCTGCTINWEKKMNLTVKTIRKKQKHK-ERGAVRTIVKQVPTDSFFNFFSPPEVPSDQEEVDDD 292
            ..||||.|:|:|..|:|:|||:|||||| ..|.|||:.|.|..|||||||:|||:| :..::|||
  Rat   253 MGCTGCQIDWKKGKNVTLKTIKKKQKHKGHGGTVRTVTKTVSNDSFFNFFAPPEIP-ENGDLDDD 316

  Fly   293 SQQILATDFEIGHFLRARIIPKAVLYYTG-DIVDDEDDEDEEEYDENE 339
            ::.|||.||||||||...|||::||::|| ||.||.||.|||..|.:|
  Rat   317 AEAILAADFEIGHFLCEHIIPRSVLFFTGEDIEDDGDDYDEEGEDADE 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nap1NP_001246485.1 NAP 55..321 CDD:279323 140/272 (51%)
RGD1560617XP_038936256.1 NAP 76..344 CDD:395763 140/271 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345533
Domainoid 1 1.000 292 1.000 Domainoid score I1462
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 328 1.000 Inparanoid score I2380
OMA 1 1.010 - - QHG53841
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000988
OrthoInspector 1 1.000 - - otm45656
orthoMCL 1 0.900 - - OOG6_100833
Panther 1 1.100 - - LDO PTHR11875
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X426
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.900

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