DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13562 and Lipc

DIOPT Version :9

Sequence 1:NP_001246484.1 Gene:CG13562 / 37797 FlyBaseID:FBgn0034928 Length:342 Species:Drosophila melanogaster
Sequence 2:XP_006243421.1 Gene:Lipc / 24538 RGDID:3009 Length:510 Species:Rattus norvegicus


Alignment Length:316 Identity:58/316 - (18%)
Similarity:106/316 - (33%) Gaps:76/316 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 LSGSGCSPTDKFAIVLHGW-----------------IQSCSDEWALSLIERLSYYRGGCVI--CI 129
            |...|.:.:....:::|||                 :....:.|...::..|...:...|.  .:
  Rat    73 LQECGFNSSHPLVMIIHGWSGSESATVGKDSDNDSQVDGLLETWIWKIVGALKSRQSQPVNVGLV 137

  Fly   130 DYSVVASSSYMRLYTNFDTLTGAISSIILTLFR-QGFDPKRGYMFGFSFGGQLASAVGRSLRPHH 193
            |:..:|...|.....|...:...:::::|.|.. ..|...:.::.|:|.|..::...|.|:....
  Rat   138 DWISLAYQHYAIAVRNTRVVGQEVAALLLWLEESMKFSRSKVHLIGYSLGAHVSGFAGSSMGGKR 202

  Fly   194 IIESIDTCDMAGPGFDPIAVDHSKAGKHVQCFHSSRDKGTFVYSCH---RNIMLGSCGLKQPSVA 255
            .|..|...|.|||.|:..:.:.          ..|.|...||.:.|   |..|..|.|:|||...
  Rat   203 KIGRITGLDPAGPMFEGTSPNE----------RLSPDDANFVDAIHTFTREHMGLSVGIKQPIAH 257

  Fly   256 SQL------------------HLGSHGL--------C-----VDIYINTFDYP------FYAVN- 282
            ...                  |:..|||        |     |.::|::..:.      |...| 
  Rat   258 YDFYPNGGSFQPGCHFLELYKHIAEHGLNAITQTIKCAHERSVHLFIDSLQHSNLQNTGFQCSNM 322

  Fly   283 --YTPPECFTWQKTAKIPDGYTVGYEENFDSQVTGQIFVPTSLHYPYNLSKKQLKL 336
              ::...|...:|......||.:..:....|:.   :|:.|....|:.:...|.|:
  Rat   323 DSFSQGLCLNCKKGRCNSLGYDIRRDRPRKSKT---LFLITRAQSPFKVYHYQFKI 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13562NP_001246484.1 Abhydrolase 64..>208 CDD:304388 26/143 (18%)
LipcXP_006243421.1 Lipase 18..366 CDD:278576 55/305 (18%)
Pancreat_lipase_like 47..362 CDD:238363 55/301 (18%)
PLAT_LPL 369..504 CDD:238856 2/7 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11610
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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