DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13562 and Lpl

DIOPT Version :10

Sequence 1:NP_001246484.1 Gene:CG13562 / 37797 FlyBaseID:FBgn0034928 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_032535.2 Gene:Lpl / 16956 MGIID:96820 Length:474 Species:Mus musculus


Alignment Length:339 Identity:76/339 - (22%)
Similarity:127/339 - (37%) Gaps:70/339 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 DAQKTMKVMFYKNNTKTMETSAYDDAYDLSG-----SGC--SPTDKFAIVLHGW-IQSCSDEWAL 112
            ||.:....:..|...:|.|.:|.|..:.:.|     |.|  :.:.|..:|:||| :....:.|..
Mouse    29 DAGRDFSDIESKFALRTPEDTAEDTCHLIPGLADSVSNCHFNHSSKTFVVIHGWTVTGMYESWVP 93

  Fly   113 SLIERLSYYR--GGCVICIDYSVVASSSYMRLYTNFDTLTGAISSIILTLFRQGFD-P-KRGYMF 173
            .|:..| |.|  ...||.:|:...|...| .:...:..|.|...:..:....:.|: | ...::.
Mouse    94 KLVAAL-YKREPDSNVIVVDWLYRAQQHY-PVSAGYTKLVGNDVARFINWMEEEFNYPLDNVHLL 156

  Fly   174 GFSFGGQLASAVGRSLRPHHIIESIDTCDMAGPGF--------------DPIAVDHS-------- 216
            |:|.|...|...| || .:..:..|...|.|||.|              |.:.|.|:        
Mouse   157 GYSLGAHAAGVAG-SL-TNKKVNRITGLDPAGPNFEYAEAPSRLSPDDADFVDVLHTFTRGSPGR 219

  Fly   217 -----KAGKHVQCFHSSRDKGTFVYSCHRNI-----MLGSCGLKQPSVASQLHLGSHGLCVDIYI 271
                 |...||..:.:.   |||...|  ||     ::...||..   ..||...||...:.::|
Mouse   220 SIGIQKPVGHVDIYPNG---GTFQPGC--NIGEAIRVIAERGLGD---VDQLVKCSHERSIHLFI 276

  Fly   272 NTF---DYPFYAVNYTPPE------CFTWQKTAKIPDGYTVGYEEN-FDSQVTGQIFVPTSLHYP 326
            ::.   :.|..|......|      |.:.:|..    ...:|||.| ..::.:.::::.|....|
Mouse   277 DSLLNEENPSKAYRCNSKEAFEKGLCLSCRKNR----CNNLGYEINKVRAKRSSKMYLKTRSQMP 337

  Fly   327 YNLSKKQLKLLTKG 340
            |.:...|:|:...|
Mouse   338 YKVFHYQVKIHFSG 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13562NP_001246484.1 alpha/beta hydrolases 64..>208 CDD:473884 39/155 (25%)
LplNP_032535.2 Interaction with GPIHBP1. /evidence=ECO:0000250|UniProtKB:P06858 32..53 4/20 (20%)
lipo_lipase 33..472 CDD:132274 74/335 (22%)
Essential for determining substrate specificity. /evidence=ECO:0000250|UniProtKB:P06858 243..266 7/27 (26%)
Important for interaction with lipoprotein particles. /evidence=ECO:0000250|UniProtKB:P06858 417..421
Important for heparin binding. /evidence=ECO:0000250|UniProtKB:P06858 430..434
Interaction with GPIHBP1. /evidence=ECO:0000250|UniProtKB:P06858 443..467
Blue background indicates that the domain is not in the aligned region.

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