DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lpt and SET3

DIOPT Version :9

Sequence 1:NP_611847.2 Gene:Lpt / 37795 FlyBaseID:FBgn0263667 Length:1482 Species:Drosophila melanogaster
Sequence 2:NP_012954.3 Gene:SET3 / 853900 SGDID:S000001737 Length:751 Species:Saccharomyces cerevisiae


Alignment Length:916 Identity:162/916 - (17%)
Similarity:294/916 - (32%) Gaps:279/916 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   397 SGPGSSQQTIDSIVLSAMDSSSEQL----SLKEIELDPLEGKPTMDPSSDELHKLPTGKKKVCLT 457
            |.|.|.:|       |.:|.:|..|    ..|..|.....|..|.....||.|:           
Yeast     2 SVPNSKEQ-------SLLDDASTLLLFSKGKKRAEEASKIGSKTDTIEHDESHE----------- 48

  Fly   458 SVRGRSGKFVLHRMGVMS----QINKKRSTRGKGRQLALPTISSDRCLSRSMETDLTSDKKLLLC 518
              |.:.|...:....:.:    .:..|::|.....:.|..|.:.:       ||: ...:|....
Yeast    49 --REKKGAIEMAAAALATASTVSLPLKKATEQSAAEAATSTAAKE-------ETE-NQPQKQPQW 103

  Fly   519 SARDKFIQAQD---ICVMCGSLGIESDSVMITCAQCGQCYHPYCAGVKPSRGILQKGWRCLDCTV 580
            ...|.:|...|   |..:| .|. :.|...|.|..|.:..|..|.|:| ..|:....:.|..|..
Yeast   104 PVPDSYIVDPDAGIITCIC-DLN-DDDGFTIQCDHCNRWQHAICYGIK-DIGMAPDDYLCNSCDP 165

  Fly   581 CE---GCGKKNDEARLLLCDECDISYHIYCVNPPLETVPTGNWKCSFCTLCQKCGR---NPTEKS 639
            .|   ...:|..:.|:          ::..|.|........|         :..||   :.|..|
Yeast   166 REVDINLARKIQQERI----------NVKTVEPSSSNNSASN---------KNNGRDRASSTTIS 211

  Fly   640 EFGDSNMLECPSCTSQSSCPVCKVSYSNGEMIIQCEHCELWAHFHCDSVNAQLTIDHYDNNVYKC 704
            :.|||                                      |..|..|.    :|.|      
Yeast   212 DVGDS--------------------------------------FSTDQDNT----NHRD------ 228

  Fly   705 FKCRCSTRSTNSL----ADAKFGNEDSLAITPQGSKPFVHITASSG----PSFDSKSGAERNHPT 761
             |.|....|.||:    ..|...:.|.|...|:..:.|:....:.|    |..|:...::...|.
Yeast   229 -KRRKRNPSNNSIDSKNESASVNSSDGLTSMPKKKEHFLSAKDAYGAIYLPLKDNVFKSDLIEPF 292

  Fly   762 LSGDMPESAPEALHWIDGVCLSESGLGMIKSLSTEIKRKRKM---RQALGNGKDGQL-------- 815
            |:..|.:      :|:     .:......||:|.|:|....:   |...|..|.|..        
Yeast   293 LNKHMDD------NWV-----IQYPHKTFKSVSIEVKPYADIAYSRTYPGFTKLGVYLKKDCIKG 346

  Fly   816 ----EAAAEEALEKYKDGM--------VWDGTENAI------PEGFTISINDEGVNILRKKRQRN 862
                |...|  |:.||:.:        :|...:..:      |......::......||:..|.|
Yeast   347 DFIQEILGE--LDFYKNYLTDPRNHYRIWGTAKRRVIFHSHWPIYIDARLSGNSTRYLRRSCQPN 409

  Fly   863 LQKLGIGGFSVRNRGLKKDSEETTAVDQINSLMTMDKKKKIIRKKQKNKLIEAYPVYLQEAFFGK 927
            ::.:.|......||..|....:::.:            |.::|..:  .:.|...:|::..:..|
Yeast   410 VELVTIKLQDTDNRNDKSSGRKSSRI------------KFVLRALR--DISEDEELYIKWQWDSK 460

  Fly   928 -PLLEGGELVMADT-DSSDEIDA-----SMKVYFTRPE---GKSPANQDTLAVNKSPAKTVKKVK 982
             |:|   :|:...| ||.|:::.     |::...:..|   |.:..:...|.|.:......|.||
Yeast   461 HPIL---KLIKGMTIDSLDDLERYGLINSVETILSNGECGCGNNSKDCYLLKVKRYAQSLYKSVK 522

  Fly   983 AELKTENKTVFIQQMPMGIQNKNGTTPVSNVFDPLQAEISNTV--------------FANRHPLD 1033
            :..|..|:....:.:......|....|   :...|:.:..||:              |.||:   
Yeast   523 SRGKMNNRYKLNEILNQYNCKKRREPP---ILHRLEEKAQNTIERAPILLNNFYRQKFLNRN--- 581

  Fly  1034 ALASPNVPELDMANSVSTVPSAEVIEKPMR--------------------ESPAVL--------- 1069
                 |.|::...|::.:..:.:.|.||.:                    |.|.::         
Yeast   582 -----NGPKIPQKNTIDSTNNPDDIAKPFKFALFAQHSSNISVPKKNETSEKPLIITKSTDYDES 641

  Fly  1070 ----VDSFMVPNQLPQEQKFHNQLYLGGNTLVNPAQQLQFRQQAPQNANKQNMQTIMSQVVLQTE 1130
                ::...:|..||..:.        .....|..::.|     .:|.:|.:....:|....:..
Yeast   642 HITNIEELPIPVLLPINKT--------SRQTANDVEESQ-----SKNEHKLSRTPSLSNFNKELS 693

  Fly  1131 KRPEEEQ-KVVEPVTE-TLNAGTQKTAEKMRKDEDLGLMATISAVLYANTEHPNLKELFPIWNDR 1193
            |..:..| |..|.:|| ::|:..:.|.|.:....|           :::::..:.|:|  .:.|.
Yeast   694 KEAQHSQAKTKEIMTEASVNSRRESTPESIMHLSD-----------FSSSQLHSKKKL--SFADY 745

  Fly  1194 CKQILK 1199
            .|::||
Yeast   746 RKKLLK 751

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LptNP_611847.2 ePHD1_KMT2C_like 109..191 CDD:277135
PHD1_KMT2C_like 205..250 CDD:276984
PHD2_KMT2C_like 252..298 CDD:276985
PHD_SF 337..392 CDD:304600
PHD4_KMT2C_like 530..578 CDD:276987 13/47 (28%)
PHD5_KMT2C_like 580..625 CDD:276988 6/47 (13%)
PHD6_KMT2C_like 657..707 CDD:276989 5/49 (10%)
NHP6B 1101..>1237 CDD:227935 20/101 (20%)
HMG 1173..1231 CDD:197700 6/27 (22%)
SET3NP_012954.3 PHD_MLL5 119..163 CDD:277025 12/46 (26%)
SET 217..722 CDD:225491 100/569 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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