DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lpt and AT3G52100

DIOPT Version :10

Sequence 1:NP_611847.2 Gene:Lpt / 37795 FlyBaseID:FBgn0263667 Length:1482 Species:Drosophila melanogaster
Sequence 2:NP_190778.2 Gene:AT3G52100 / 824373 AraportID:AT3G52100 Length:696 Species:Arabidopsis thaliana


Alignment Length:606 Identity:123/606 - (20%)
Similarity:195/606 - (32%) Gaps:230/606 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 CLCNLGEKSALGQGEILQLKAPAPAEIKDKY-------------PTD-RLREDGSRLLYGPKQAA 81
            |.|.||....| .|.          |:||.|             |.| .:.:||:..::.||.|.
plant    15 CFCVLGFSRNL-HGN----------EVKDVYLKEIHSLQEFVRNPWDAEVSKDGTVQIHVPKLAV 68

  Fly    82 SSSG---------------------------------------------DCHYELDKIGQPDVVH 101
            ..:|                                             ||..:|          
plant    69 FDTGPRIAARNVGVGSDSAMEVVAASSNLVPAKRTLVLQKKAVEVYAANDCSGDL---------- 123

  Fly   102 PAEFLDEGFVYVHRMCIMWSLRKSQISDADGAYFATHFAEFLEQKCNFCGRYGASINCKMNCRQV 166
                  |..|:|         ||...||.|..|..:  .:.|.::.:  ..:.|||.|.|     
plant   124 ------EESVFV---------RKRVFSDVDYLYLVS--VKDLNEEDH--DHHSASITCHM----- 164

  Fly   167 HHWPCAAAAGCLLILESFTVFCTEHLSQVPVICSDNNVECLSCSSLG--DLSKLIMCSTCGDHFH 229
                      |.|:                              .:|  :.:|::.|..||..:|
plant   165 ----------CYLV------------------------------EVGKSERAKMLSCKCCGKKYH 189

  Fly   230 STCI-------GLANLPDTRSGWNCARCTKCQICRQQDSNDTKYVKCEQCQKTYHASCLRPVISA 287
            ..|:       .|.|.    |.|.|..|..|:.|... .:..|::.|::|...||..|..|....
plant   190 RNCVKSWAQHRDLFNW----SSWACPSCRICEGCGTL-GDPKKFMFCKRCDDAYHCDCQHPRHKN 249

  Fly   288 IPKYGWKCNRCRVCTDCGSRTPGGGSSSRWHSHYTICDSCYQQRNKGFSCPICQKAYRAASHKEM 352
            :....:.|.:...|..|.|..||.|.|.||...:|.||:|.:...||..||:|.|.||.:....|
plant   250 VSSGPYLCPKHTKCYSCESTVPGNGQSLRWFLGHTCCDACGRLFVKGNYCPVCLKVYRDSEATPM 314

  Fly   353 VKCSWCNKFVHSTCDEEADLTAYHKKKEQNPDYDYVCPNCKSNS--------------------- 396
            |.|.:|.::||..||..:|  ..:.:.:.:.:..|.|..|:..|                     
plant   315 VCCDFCQRWVHCQCDGISD--EKYMQFQVDGNLQYKCSTCRGESYQVKDLEDAVQEIWKRKDMAD 377

  Fly   397 -----------------------SGPGSSQQTIDSIVLSAMDSSSEQLSLKEIELDPLEGKPTMD 438
                                   :.|||.::.:..   .||.:..|:..|:.:.:.  ..:| .|
plant   378 KDLIASLKASARVVGQTGGAPLMNQPGSVERKVSE---KAMVNGEEEKPLRVLRIK--SSRP-QD 436

  Fly   439 PSSDELHK----LPTGKKKVCLTSVRGRSGKFVLHRMGVMSQIN---KKRSTRGKGRQLALPTIS 496
            ..|::..|    |.|.|.|..:.|:..|       :.||.:..:   .|.:::..|:|   ..:.
plant   437 SDSEKFGKHATELSTVKAKKLVISIGPR-------KTGVTNSTSCDVSKTASKSNGKQ---EKLQ 491

  Fly   497 SDRCLSRSMETDL---TSDKK 514
            ::...||.....|   .||:|
plant   492 AEETFSREERRSLLGKNSDEK 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LptNP_611847.2 ePHD1_KMT2C_like 109..191 CDD:277135 16/81 (20%)
PHD1_KMT2C_like 205..250 CDD:276984 12/53 (23%)
PHD2_KMT2C_like 252..298 CDD:276985 10/45 (22%)
PHD_SF 337..392 CDD:473978 17/54 (31%)
PHD4_KMT2C_like 530..578 CDD:276987
PHD5_KMT2C_like 580..625 CDD:276988
PHD6_KMT2C_like 657..707 CDD:276989
NHP6B 1101..>1237 CDD:227935
HMG_KMT2C-like 1157..1223 CDD:438813
AT3G52100NP_190778.2 AIR1 <181..268 CDD:227414 23/91 (25%)
PHD_SF 215..257 CDD:473978 9/42 (21%)
PHD_SF 298..352 CDD:473978 17/55 (31%)
PTZ00108 <366..614 CDD:240271 28/163 (17%)
Blue background indicates that the domain is not in the aligned region.

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