DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lpt and NSD2

DIOPT Version :9

Sequence 1:NP_611847.2 Gene:Lpt / 37795 FlyBaseID:FBgn0263667 Length:1482 Species:Drosophila melanogaster
Sequence 2:NP_001035889.1 Gene:NSD2 / 7468 HGNCID:12766 Length:1365 Species:Homo sapiens


Alignment Length:750 Identity:140/750 - (18%)
Similarity:212/750 - (28%) Gaps:320/750 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 CLSCSSLGDLSKLIMC-STCGDHFHSTCIGLANLPDTRSGWNCARCT----KCQICRQQDSNDTK 265
            |..|...|   .|::| ..|...||..|:||:..|:.|  :.|:.|.    .|.:|: :...|.|
Human   670 CQLCEKPG---SLLLCEGPCCGAFHLACLGLSRRPEGR--FTCSECA
SGIHSCFVCK-ESKTDVK 728

  Fly   266 YVKCEQCQKTYHASCLRPV-ISAIPKYGWKCNRCRVCTDCGSRTPGGGSSSRWHSHYTICDSCYQ 329
            .....||.|.||.:|::.. ::.....|::| ....|..|.:..|.....|:  .....|..|..
Human   729 RCVVTQCGKFYHEACVKKYPLTVFESRGFRC-PLHSCVSCHASNPSNPRPSK--GKMMRCVRCPV 790

  Fly   330 QRNKGFSC------------PICQKAYRAAS---HKEMVKCSWCNKFVHS-----TCDEEADLTA 374
            ..:.|.:|            .||...:.|..   |...|..|||  ||.|     .|.|... .|
Human   791 AYHSGDACLAAGCSVIASNSIICTAHFTARKGKRHHAHVNVSWC--FVCSKGGSLLCCESCP-AA 852

  Fly   375 YHKK--KEQNPDYDYVCPNCKSN------------------------------------------ 395
            :|..  ..:.||..:.|.:|::.                                          
Human   853 FHPDCLNIEMPDGSWFCNDCRAGKKLHFQDIIWVKLGNYRWWPAEVCHPKNVPPNIQKMKHEIGE 917

  Fly   396 -----------------------SSGPGSSQQTIDSI------VLSAMDSSSEQLSL-------- 423
                                   ....||..|.:..|      .|...::...::.|        
Human   918 FPVFFFGSKDYYWTHQARVFPYMEGDRGSRYQGVRGIGRVFKNALQEAEARFREIKLQREARETQ 982

  Fly   424 ---------KEIELDPLEGKP---TMDPSSDELHKL--------PTGKKKVCLTSVR-------- 460
                     |.|:::...||.   |.|.|  |:.|.        |.|....||..:.        
Human   983 ESERKPPPYKHIKVNKPYGKVQIYTADIS--EIPKCNCKPTDENPCGFDSECLNRMLMFECHPQV 1045

  Fly   461 GRSGKFVLHRMGVMSQINKKR--STRGKGRQLAL---------------PTISSDRCLSR---SM 505
            ..:|:|..::.....|..:.:  .|.|||..|..               ..|..:.|::|   :.
Human  1046 CPAGEFCQNQCFTKRQYPETKIIKTDGKGWGLVAKRDIRKGEFVNEYVGELIDEEECMARIKHAH 1110

  Fly   506 ETDLTSDKKLLLCSARDKFIQAQDICVMCGSLGIESDSVMITCAQCGQCYHPYCAGVK------- 563
            |.|:|  ...:|...:|:.|.|       |..|..|..:..:|       .|.|..:|       
Human  1111 ENDIT--HFYMLTIDKDRIIDA-------GPKGNYSRFMNHSC-------QPNCETLKWTVNGDT 1159

  Fly   564 ----------PSRGILQKGWRCLDC-----TVCEGCGKKN------------------------- 588
                      |:...|...:. |||     |||. ||..|                         
Human  1160 RVGLFAVCDIPAGTELTFNYN-LDCLGNEKTVCR-CGASNCSGFLGDRPKTSTTLSSEEKGKKTK 1222

  Fly   589 ------------------------DEARLLLCDE--CDISYHIYCVNPPLETVPTGNWKCSFCTL 627
                                    |..:|:|||.  |..:||:.|:.  |...|.|.|:|.: ..
Human  1223 KKTRRRRAKGEGKRQSEDECFRCGDGGQLVLCDRKFCTKAYHLSCLG--LGKRPFGKWECPW-HH 1284

  Fly   628 CQKCGRNPTEKSEFGDSNMLECPSCTSQSSCPVCKVSYSNGEMIIQCEHCELWAHFHCDSVNAQL 692
            |..||:                   .|.|.|.:|..|:           |:              
Human  1285 CDVCGK-------------------PSTSFCHLCPNSF-----------CK-------------- 1305

  Fly   693 TIDHYDNNVYKC------FKCR-----CSTRSTNS 716
              :|.|...:.|      :.|.     .|.|||.:
Human  1306 --EHQDGTAFSCTPDGRSYCCEHDLGAASVRSTKT 1338

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
LptNP_611847.2 ePHD1_KMT2C_like 109..191 CDD:277135
PHD1_KMT2C_like 205..250 CDD:276984 14/44 (32%)
PHD2_KMT2C_like 252..298 CDD:276985 12/46 (26%)
PHD_SF 337..392 CDD:304600 19/76 (25%)
PHD4_KMT2C_like 530..578 CDD:276987 10/64 (16%)
PHD5_KMT2C_like 580..625 CDD:276988 19/95 (20%)
PHD6_KMT2C_like 657..707 CDD:276989 7/55 (13%)
NHP6B 1101..>1237 CDD:227935
HMG 1173..1231 CDD:197700
NSD2NP_001035889.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 149..170
MSH6_like 218..337 CDD:99898
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 376..455
HMG-box 458..507 CDD:238037
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 516..658
TNG2 <546..710 CDD:227367 14/44 (32%)
PHD1_NSD1_2 669..711 CDD:277118 14/45 (31%)
PHD2_NSD2 716..762 CDD:277121 12/47 (26%)
PHD3_NSD2 763..816 CDD:277124 10/54 (19%)
PHD4_NSD2 833..873 CDD:277127 12/42 (29%)
WHSC1_related 878..972 CDD:99899 5/93 (5%)
AWS 1012..1062 CDD:197795 8/49 (16%)
SET 1063..1186 CDD:214614 27/139 (19%)
S-adenosyl-L-methionine binding. /evidence=ECO:0000269|PubMed:27571355, ECO:0007744|PDB:5LSU 1115..1118 1/4 (25%)