DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lpt and Setd5

DIOPT Version :9

Sequence 1:NP_611847.2 Gene:Lpt / 37795 FlyBaseID:FBgn0263667 Length:1482 Species:Drosophila melanogaster
Sequence 2:XP_006506740.1 Gene:Setd5 / 72895 MGIID:1920145 Length:1467 Species:Mus musculus


Alignment Length:1246 Identity:252/1246 - (20%)
Similarity:386/1246 - (30%) Gaps:435/1246 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   389 CPNCKSNSSGP-----GSSQQTIDSIVLSAMDSSSEQLSLKEIELDPLEGKPTMDPSSDELHKLP 448
            |..|:..|.|.     ...|..|.....||.:|..|:||...:.....:..||    |..|....
Mouse   132 CDKCRGMSRGKVIRLHRRKQDNISGGDSSATESWDEELSPSTVLYTATQHTPT----SITLTVRR 192

  Fly   449 TGKKKVCLTSVRGRSG---KFVLHRMGVMSQINKKRSTRGKGRQLALPT----------ISSDRC 500
            |..||...:..:||:.   |.:.:.......:: :.:|.|...::.|.|          .|:|  
Mouse   193 TKPKKRKKSPEKGRAAPKTKKIKNSPSEAQNLD-ENTTEGWENRIRLWTDQYEEAFTNQYSAD-- 254

  Fly   501 LSRSMETDLTSDKKLLLCSARDKFIQAQDICVMCGSLGIESDSVMITCAQCGQCYHPYCAGVKPS 565
            :..::|..|.|:|:.:...|....|...::.  |.:..|.|...:    |.|:     ...|:..
Mouse   255 VQNALEQHLHSNKEFVGKPAILDTINKTELA--CNNTVIGSQMQL----QLGR-----VTRVQKH 308

  Fly   566 RGILQKGW-RCLDCTVCEGCGKKNDEARLLLCDECDISYHIYCVNPPLETVPTGNWKCSFCTLCQ 629
            |.||:... ..||..:.|..||      ::|..:.:::.|.:....|.....:   |.:...:| 
Mouse   309 RKILRAARDLALDTLIIEYRGK------VMLRQQFEVNGHFFKKPYPFVLFYS---KFNGVEMC- 363

  Fly   630 KCGRNPTEKSEFGDSNMLECPSCTSQSSCPVCKVSYSNGEMIIQCEHCELWAHFHCDSVNAQLTI 694
                  .:...||:.......|||     |..:|.:...:.:|   |..::| ....:.:|::||
Mouse   364 ------VDARTFGNDARFIRRSCT-----PNAEVRHMIADGMI---HLCIYA-VSAITKDAEVTI 413

  Fly   695 --DH-YDNNVYKCFKCRCSTRSTNSLADAKFGNEDSLAITPQGSKPFVHITASSGPSFDSKSGAE 756
              |: |.|..|| ..|.|...:.|.....:..|...|.:.|.             |||       
Mouse   414 AFDYEYSNCNYK-VDCACHKGNRNCPIQKRNPNAAELPLPPP-------------PSF------- 457

  Fly   757 RNHPTLSGDMPESAPEALHWIDGVCLSESGLGMIKSLSTEIKRKRKMRQALGNGKDGQLEAAAEE 821
               ||:..:                                .|:||.|:     |:.:||...|.
Mouse   458 ---PTIGAE--------------------------------TRRRKARR-----KELELEQQNEV 482

  Fly   822 ALEKYKDGMVWDGTENAIPEGFTISINDEGVNILRKKRQRNLQKLGIGGFSVRNRGLKKDSEETT 886
            ..|..      |.....:||..|:|...|.|:...:|.:                  :::.||.|
Mouse   483 PEENP------DPQPQEVPEKVTVSNEHEEVDNPEEKPE------------------EEEKEEAT 523

  Fly   887 AVDQINSLMTM----DKKKKII---------RKKQKNKLIEAYPVYLQEAFFGKPLLEGGELVMA 938
            . ||.||..:.    |:|.:.|         |||::::.:|                        
Mouse   524 D-DQENSAHSRRTREDRKVEAIMHAFESLEKRKKRRDQPVE------------------------ 563

  Fly   939 DTDSSD-EIDASMKVYFTRPEGKSPANQDTLAVNKSPAKTVKKVKAELKTENKTVFIQQMPMGIQ 1002
             ..||| ||..|........|.|:.|.:..:                                  
Mouse   564 -QSSSDIEITTSSSEIVVGEETKTAAPESEV---------------------------------- 593

  Fly  1003 NKNGTTPVSNVFDPLQAEISNTVFANR--HPLDALASPNVPELDMANSVSTVPSAEVIEKPMRES 1065
                ::|||||..|...: |..|...|  |..|..|...:|:         .|.|    ||.|..
Mouse   594 ----SSPVSNVAIPSTPQ-STGVNTRRSSHAGDVAAEKPIPK---------PPPA----KPSRPR 640

  Fly  1066 PAVLVDSFMVPNQ---LPQEQKFHNQLYL--------GGNTLVNPAQQLQFRQQAPQNANK---- 1115
            |...:..:...:.   ..|:|....|..|        |.|..|.|          |:..|.    
Mouse   641 PKSRISRYRTSSAQRLKRQKQAIAQQAELSQAALEEGGSNNSVTP----------PEAGNTDSSG 695

  Fly  1116 QNMQ------TIM----SQVVLQTEKRPEEEQKVVEPVTETLNAGTQKTAEK--------MRKDE 1162
            :|.|      |::    |.|.....|.|:.::.:   |||.||    ..|||        :|...
Mouse   696 ENRQLTGSDPTVISVTGSHVNRAASKYPKTKKYL---VTEWLN----DKAEKQECPVECPLRITT 753

  Fly  1163 DLGLMAT--------ISAVLYANTEHPNLKELFPIWNDR-------------CKQILKRW----- 1201
            |..::||        |.:.|...|....::...|...:|             ||   |||     
Mouse   754 DPTVLATTLNMLPGLIHSPLICTTPKHYIRFGSPFMPERRRRPLLPDGTFSSCK---KRWIKQAL 815

  Fly  1202 -------RSLCNEKKAPFLQKA----------KDNRSAL--------RQRREQN--KIPMPPKPQ 1239
                   .|:..|.:...|.::          |||...|        |...|||  |:..|..| 
Mouse   816 EEGMTQTSSVPQETRTQHLYQSNETSNSSSICKDNADLLSPLKKWKSRYLMEQNITKLLQPLSP- 879

  Fly  1240 KQEEMGRVWKQPPKLKEDQPNMFV---TYNG-----NAYDMGNYVGGSAQAASNNPNPHHVMPNV 1296
                   |...||......|.:..   |:.|     |.|.:......|...||.:..|      :
Mouse   880 -------VTPPPPSSGSKSPQLTTPGQTHPGEEECRNGYSLMFSPITSLTTASRSNTP------L 931

  Fly  1297 NDNLVIKATMQRTQVHTTAASTLKMTTVDNRLELNTAVYGTEP-------------IGD---KKL 1345
            ...|..:..:..|:|....:||.......:.|..|.....:.|             .||   ..|
Mouse   932 QFELCHRKDLDLTKVGFPDSSTHSCADRPSLLNCNHPDLASHPSVVPTSEAGFPSRSGDGPQTLL 996

  Fly  1346 RNLLQKNSTEPMLMGANSDLFLGNDVMRL-GMMQNTPIT-QNNPMLSISGKSQPSEGRS------ 1402
            ||..|...||..||.|.|.|   |.:.|. |:.:.:|:. ...|:....|...|:||.|      
Mouse   997 RNSDQAFRTEFNLMYAYSPL---NAMPRADGLYRGSPLVGDRKPLHLDGGYCSPAEGFSSRYEHG 1058

  Fly  1403 LEQDVKLGE-------------------PQEATSSAVEL--------ENVGFSDLLGGLGEGDDD 1440
            ..:|:..|.                   ||....|.:|.        ||         .|.|:|.
Mouse  1059 FMKDLSRGSMSPGGERTCEGVPSAPQNPPQRKKVSLLEYRKRKQEAKEN---------SGGGNDS 1114

  Fly  1441 DLLKSLTSEMG 1451
            ...||.:|..|
Mouse  1115 SQSKSKSSGAG 1125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LptNP_611847.2 ePHD1_KMT2C_like 109..191 CDD:277135
PHD1_KMT2C_like 205..250 CDD:276984
PHD2_KMT2C_like 252..298 CDD:276985
PHD_SF 337..392 CDD:304600 1/2 (50%)
PHD4_KMT2C_like 530..578 CDD:276987 10/48 (21%)
PHD5_KMT2C_like 580..625 CDD:276988 7/44 (16%)
PHD6_KMT2C_like 657..707 CDD:276989 13/52 (25%)
NHP6B 1101..>1237 CDD:227935 44/210 (21%)
HMG 1173..1231 CDD:197700 20/102 (20%)
Setd5XP_006506740.1 SET_SETD5 292..441 CDD:380958 38/183 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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