DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lpt and BRDT

DIOPT Version :9

Sequence 1:NP_611847.2 Gene:Lpt / 37795 FlyBaseID:FBgn0263667 Length:1482 Species:Drosophila melanogaster
Sequence 2:NP_001229735.2 Gene:BRDT / 676 HGNCID:1105 Length:951 Species:Homo sapiens


Alignment Length:797 Identity:146/797 - (18%)
Similarity:261/797 - (32%) Gaps:289/797 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   809 NGK-DGQLEAAAEEAL-EKYKDGMVW------DGTENAIPEGFTISINDEGVNILRKKRQRNLQK 865
            ||: ..||:...:..| :.:|....|      |..:..:|:.:||..|...:|.::|:       
Human    25 NGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKR------- 82

  Fly   866 LGIGGFSVRNRGLKKDSEETTAVDQINSLMTMDKKKKIIRKKQKNKLIEAYPVYLQEAFFGKPLL 930
                   :.|:...|.||   .::..|::.:                    ..||    :.||  
Human    83 -------LENKYYAKASE---CIEDFNTMFS--------------------NCYL----YNKP-- 111

  Fly   931 EGGELVMADTDSSDEIDASMKVYFTRPEGKSPANQDTLAVNKSPAKTVKKVKAELKTENKTVFIQ 995
             |.::|:        :..:::..|.:...:.|..:..:.|.    :.:||.||....:|..|   
Human   112 -GDDIVL--------MAQALEKLFMQKLSQMPQEEQVVGVK----ERIKKGKAGGTQQNIAV--- 160

  Fly   996 QMPMGIQNKNGTTPVSNVFDPLQAEISNTVFANRHPLDALASPNVPELDMANSVS---------- 1050
               ...:.|:..:....||.  |.||. :||    |..:::..||.:....||.|          
Human   161 ---SSAKEKSSPSATEKVFK--QQEIP-SVF----PKTSISPLNVVQGASVNSSSQTAAQVTKGV 215

  Fly  1051 ------TVPSAEVIEKPMRESPAVLVDSFMVP--------NQLPQEQKFHNQLYLGGNTLVNPAQ 1101
                  |.|:...::.....||.....|..:|        |.||..|:.:|.:     ..|...:
Human   216 KRKADTTTPATSAVKASSEFSPTFTEKSVALPPIKENMPKNVLPDSQQQYNVV-----KTVKVTE 275

  Fly  1102 QLQ--------------------FRQQAPQNA-----------NKQNMQTIMSQVVLQTEK---- 1131
            ||:                    |......||           |..::.||..::..|..|    
Human   276 QLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYKDAYK 340

  Fly  1132 ---------------RPEEEQKV------------------VEPV------------TETLNAGT 1151
                           .|.:.:.|                  :|||            |||  .|.
Human   341 FAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESMPLCYIKTDITET--TGR 403

  Fly  1152 QKTAEKM--------RKDEDLGLMATISAVLYANTEHPNLKELFPIWNDRCKQILKRWRSLCNEK 1208
            :.|.|..        .:||.:..:|.:...|.|  .|..|:.|..:   ..:::.|:......||
Human   404 ENTNEASSEGNSSDDSEDERVKRLAKLQEQLKA--VHQQLQVLSQV---PFRKLNKKKEKSKKEK 463

  Fly  1209 KAPFLQKAKDN------RSALRQRREQNKIPMPPKPQKQEEMGRVWKQPPKLK-EDQPN------ 1260
            |...:..:.:|      :..|:::.::|:    ||.:||:.:|        || ||:.|      
Human   464 KKEKVNNSNENPRKMCEQMRLKEKSKRNQ----PKKRKQQFIG--------LKSEDEDNAKPMNY 516

  Fly  1261 -----MFVTYN---GNAYDMGNYVGGSAQAASNNPNPHHVMPNVNDNLVIKATMQRTQVHTTAAS 1317
                 :.:..|   |:......::..|.:.:.:|.||..:               .....|..||
Human   517 DEKRQLSLNINKLPGDKLGRVVHIIQSREPSLSNSNPDEI---------------EIDFETLKAS 566

  Fly  1318 TLKMTTVDNRLELN---TAVYGTEPIG--------DKKLRNLLQKNSTEPMLMGANSDLFLGNDV 1371
            ||:        ||.   :|.....|:.        .|:..:..:|...|..|:..|:.|      
Human   567 TLR--------ELEKYVSACLRKRPLKPPAKKIMMSKEELHSQKKQELEKRLLDVNNQL------ 617

  Fly  1372 MRLGMMQNTPITQNNPMLSISGKSQPSEGRSLEQDVKLGEPQEATSSAVELENVGFSDLLGGLGE 1436
                   |:...|..     |.|:|||  :::|...:|.|...::||:.|.|: ..|||......
Human   618 -------NSRKRQTK-----SDKTQPS--KAVENVSRLSESSSSSSSSSESES-SSSDLSSSDSS 667

  Fly  1437 GDDDDLLKSLTSEMGDD 1453
            ..:.::....|....:|
Human   668 DSESEMFPKFTEVKPND 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LptNP_611847.2 ePHD1_KMT2C_like 109..191 CDD:277135
PHD1_KMT2C_like 205..250 CDD:276984
PHD2_KMT2C_like 252..298 CDD:276985
PHD_SF 337..392 CDD:304600
PHD4_KMT2C_like 530..578 CDD:276987
PHD5_KMT2C_like 580..625 CDD:276988
PHD6_KMT2C_like 657..707 CDD:276989
NHP6B 1101..>1237 CDD:227935 36/229 (16%)
HMG 1173..1231 CDD:197700 11/63 (17%)
BRDTNP_001229735.2 Bromo_Brdt_I_like 27..133 CDD:99929 24/157 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 206..232 2/25 (8%)
Nuclear localization signal. /evidence=ECO:0000269|PubMed:22971749 213..224 1/10 (10%)
Bromo_Brdt_II_like 276..377 CDD:99930 12/100 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 399..424 7/26 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 448..515 17/78 (22%)
BET 513..575 CDD:293640 13/84 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 614..702 21/92 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 886..928
BRD4_CDT 909..951 CDD:293710
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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