DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lpt and tbrg1

DIOPT Version :9

Sequence 1:NP_611847.2 Gene:Lpt / 37795 FlyBaseID:FBgn0263667 Length:1482 Species:Drosophila melanogaster
Sequence 2:NP_001107918.2 Gene:tbrg1 / 573117 ZFINID:ZDB-GENE-080220-62 Length:537 Species:Danio rerio


Alignment Length:330 Identity:65/330 - (19%)
Similarity:108/330 - (32%) Gaps:87/330 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   725 EDSLAITPQGSKPFVHITASSGPSFDSKSGAERNHPTLSGDMPESAPEA--LHWIDG--VCLSES 785
            |..:....|||       .|..|:.||.|.......:|..:.|....:.  |.|:|.  :.|.|:
Zfish     7 ESEMEADGQGS-------YSLFPALDSMSSLTGAAESLDPETPSEVADKPNLTWLDAAQIVLEEA 64

  Fly   786 GLGM-IKSLSTEIKRKRKMRQALGNGKDGQLEAAAEEALEKYKDGMVWDGTENAIPEGFTISIND 849
            |..| ||    |||::...|..:.:.....|||......:|.........:.|.:   |.:..::
Zfish    65 GRPMHIK----EIKQRIIDRGLVQSNAKSSLEAVMYRETQKGSRRFKRIESRNGV---FALLTDE 122

  Fly   850 EGVNILRKKRQRNLQKLGI-GGFSVRNRG------------------------------------ 877
            |        ||..||.... ..||....|                                    
Zfish   123 E--------RQHALQAFSAQSAFSSSGSGSSLGPLPSPTSHTESRSKVRKGPRKNQNEKYRLKYI 179

  Fly   878 -LKKDS-----EETTAVDQINSLMTMDKKKKIIRKKQKNKLIEAYPVYLQEAFFGKPLLEGGELV 936
             |:|.|     |.....|:|..|     ::|.:|.|::.:.:....:..|....|:|::..|   
Zfish   180 RLRKASRAMIFENAALYDEIAHL-----EEKFVRAKEERRFLLKSLLQYQSVAEGEPVVTPG--- 236

  Fly   937 MADTDSSDEIDASMKVYFTRPEGKSPA--NQDTLAVNKSPAKTVKKVKAELKTENKTVFIQQMPM 999
             ..|.:...:.:|      .|.|.:.|  :..|..::......:||.|.|.|...:....:::..
Zfish   237 -CSTHTPVALSSS------TPGGAALAGSHSQTTGLSGPEDSLLKKPKKERKERGRETSREELMR 294

  Fly  1000 GIQNK 1004
            .|..|
Zfish   295 KICKK 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LptNP_611847.2 ePHD1_KMT2C_like 109..191 CDD:277135
PHD1_KMT2C_like 205..250 CDD:276984
PHD2_KMT2C_like 252..298 CDD:276985
PHD_SF 337..392 CDD:304600
PHD4_KMT2C_like 530..578 CDD:276987
PHD5_KMT2C_like 580..625 CDD:276988
PHD6_KMT2C_like 657..707 CDD:276989
NHP6B 1101..>1237 CDD:227935
HMG 1173..1231 CDD:197700
tbrg1NP_001107918.2 HARE-HTH 52..118 CDD:282869 18/72 (25%)
FYRN 330..379 CDD:283589
FYRC 385..460 CDD:283590
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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