DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lpt and NSD3

DIOPT Version :9

Sequence 1:NP_611847.2 Gene:Lpt / 37795 FlyBaseID:FBgn0263667 Length:1482 Species:Drosophila melanogaster
Sequence 2:NP_075447.1 Gene:NSD3 / 54904 HGNCID:12767 Length:1437 Species:Homo sapiens


Alignment Length:764 Identity:156/764 - (20%)
Similarity:226/764 - (29%) Gaps:315/764 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 SDNNVECLSCSSLGDLSKLIMC-STCGDHFHSTCIGLANLPDTRSGWNCARCT----KCQICRQQ 259
            |..:..|..|.|.||  .||.| ..|..|||..|:|||:|||::  :.|..|.    .|..|: .
Human   698 SKKDTVCQICESSGD--SLIPCEGECCKHFHLECLGLASLPDSK--FICMECKTGQHPCFSCK-V 757

  Fly   260 DSNDTKYVKCEQCQKTYHASCLRPVISAI--------PKY------------------GWKCNRC 298
            ...|.|......|.|.||.:|:|...:||        |::                  ..:|.||
Human   758 SGKDVKRCSVGACGKFYHEACVRKFPTAIFESKGFRCPQHCCSACSMEKDIHKASKGRMMRCLRC 822

  Fly   299 RVCTDCGSRTPGGGSSSRWHSHYTICDSCYQQR-------NKGFSCPICQK-------------- 342
            .|....|......|  |...|.|.:..|.:.:|       |.|| |.:|.:              
Human   823 PVAYHSGDACIAAG--SMLVSSYILICSNHSKRSSNSSAVNVGF-CFVCARGLIVQDHSDPMFSS 884

  Fly   343 -AYR----------------------AASHKEMVK------CSWCNKFVHSTC------------ 366
             ||:                      :||.|:..|      |..|....|..|            
Human   885 YAYKSHYLLNESNRAELMKLPMIPSSSASKKKCEKGGRLLCCESCPASFHPECLSIEMPEGCWNC 949

  Fly   367 -DEEADLTAYHKK--------------KEQNP-----------------------DYDY------ 387
             |.:|....::|:              :..||                       .:||      
Human   950 NDCKAGKKLHYKQIVWVKLGNYRWWPAEICNPRSVPLNIQGLKHDLGDFPVFFFGSHDYYWVHQG 1014

  Fly   388 -VCP---NCKSNSSGPGSSQQTIDSIV---------LSAMDSSSEQLSL----------KEIELD 429
             |.|   ..||.:.|..|..:|....:         |.|...|.|.|.:          |.|:.:
Human  1015 RVFPYVEGDKSFAEGQTSINKTFKKALEEAAKRFQELKAQRESKEALEIEKNSRKPPPYKHIKAN 1079

  Fly   430 PLEGKPTMD-------------PSSDELHKLPTGKKKVCL------------------------- 456
            .:.||..:.             |:.:.    |.|.:..||                         
Human  1080 KVIGKVQIQVADLSEIPRCNCKPADEN----PCGLESECLNRMLQYECHPQVCPAGDRCQNQCFT 1140

  Fly   457 -----------TSVRG---------RSGKFVLHRMGVM-----SQINKKRSTRGKGRQLALPTIS 496
                       |..||         :.|:||...:|.:     .::..||:.........:.|::
Human  1141 KRLYPDAEIIKTERRGWGLRTKRSIKKGEFVNEYVGELIDEEECRLRIKRAHENSVTNFYMLTVT 1205

  Fly   497 SDRCL--------SRSM--------ET-----------------------DLTSDKKL-LLCSAR 521
            .||.:        ||.|        ||                       :||.:..| .|.:.|
Human  1206 KDRIIDAGPKGNYSRFMNHSCNPNCETQKWTVNGDVRVGLFALCDIPAGMELTFNYNLDCLGNGR 1270

  Fly   522 DKFIQAQDICVMCGSLGIESDSVMITCAQCGQCYHPYCAGVKPSRGILQKGWRCLDCTVCEGCGK 586
            .:.....|.|  .|.||:...|   .||...: .....|.:|..|..::...:.:....|..|| 
Human  1271 TECHCGADNC--SGFLGVRPKS---ACASTNE-EKAKNAKLKQKRRKIKTEPKQMHEDYCFQCG- 1328

  Fly   587 KNDEARLLLCD--ECDISYHIYCVNPPLETVPTGNWKC-------------SFCTLCQKCGRNPT 636
              |...|::||  :|..:||:.|:|  |...|.|.|:|             |||..|........
Human  1329 --DGGELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQCDECSSAAVSFCEFCPHSFCKDH 1389

  Fly   637 EKSEFGDSNMLECPSCTSQSSCPVCKVSYSNGEMIIQCEHCELWAHFHC 685
            ||.....| .||...|.|:.. |:..||            .|.|:...|
Human  1390 EKGALVPS-ALEGRLCCSEHD-PMAPVS------------PEYWSKIKC 1424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LptNP_611847.2 ePHD1_KMT2C_like 109..191 CDD:277135
PHD1_KMT2C_like 205..250 CDD:276984 20/45 (44%)
PHD2_KMT2C_like 252..298 CDD:276985 14/71 (20%)
PHD_SF 337..392 CDD:304600 21/157 (13%)
PHD4_KMT2C_like 530..578 CDD:276987 10/47 (21%)
PHD5_KMT2C_like 580..625 CDD:276988 18/59 (31%)
PHD6_KMT2C_like 657..707 CDD:276989 6/29 (21%)
NHP6B 1101..>1237 CDD:227935
HMG 1173..1231 CDD:197700
NSD3NP_075447.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 121..157
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 181..252
PWWP domain; Pfam PF00855 264..324
MSH6_like 267..383 CDD:99898
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 344..365
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 406..465
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 540..696
TNG2 <602..746 CDD:227367 21/51 (41%)
PHD type zinc finger motif 697..738 19/41 (46%)
PHD1_NSD3 703..746 CDD:277119 20/46 (43%)
PHD type zinc finger motif 745..795 13/50 (26%)
PHD2_NSD3 751..797 CDD:277122 13/46 (28%)
PHD3_NSD3 798..850 CDD:277125 10/53 (19%)
PHD type zinc finger motif 858..945 15/87 (17%)
PHD4_NSD3 917..952 CDD:277128 5/34 (15%)
PWWP domain; Pfam PF00855 954..1013 6/58 (10%)
WHSC1_related 958..1051 CDD:99899 12/92 (13%)
AWS 1094..1144 CDD:197795 5/53 (9%)
SET 1145..1268 CDD:214614 21/122 (17%)
SET domain 1149..1255 17/105 (16%)
PHD type zinc finger motif 1317..1364 17/51 (33%)
PHD5_NSD3 1323..1365 CDD:277131 17/46 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.030

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