DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lpt and PHF20L1

DIOPT Version :9

Sequence 1:NP_611847.2 Gene:Lpt / 37795 FlyBaseID:FBgn0263667 Length:1482 Species:Drosophila melanogaster
Sequence 2:XP_011515377.1 Gene:PHF20L1 / 51105 HGNCID:24280 Length:1023 Species:Homo sapiens


Alignment Length:828 Identity:148/828 - (17%)
Similarity:247/828 - (29%) Gaps:327/828 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   662 KVSYSNGEMIIQCEHCELWAHFHCDSVNAQLTIDHYDNNVYKCFKCRCSTRSTNSLADAKFGNED 726
            |:.|..|:|::   |.|.|:|             .||..:|         ..:|.|...     :
Human    35 KIDYEEGKMLV---HFERWSH-------------RYDEWIY---------WDSNRLRPL-----E 69

  Fly   727 SLAITPQGSKPFVHITASSGPSFDSKSGAE--------RNHPT---------------LSG---- 764
            ..|:..:|.|       .....||.|:|.|        |.:|.               ..|    
Human    70 RPALRKEGLK-------DEEDFFDFKAGEEVLARWTDCRYYPAKIEAINKEGTFTVQFYDGVIRC 127

  Fly   765 -------DMPESA----------PEALHW---ID--GVCL----SESGLGMIKSLSTEIKRKR-- 801
                   .|||.|          ...|.|   ||  |.|.    ||..:.::|:.:....:.:  
Human   128 LKRMHIKAMPEDAKGQFLFQVKSQHPLSWCCPIDPAGSCNQSMGSEDWIALVKAAAAAAAKNKTG 192

  Fly   802 -KMRQALGNGKDGQLEAAAEEALEKYKDGMVW-------DGTENAI--------------PEGFT 844
             |.|.:..:.||            |.||...|       :.|...|              .|.| 
Human   193 SKPRTSANSNKD------------KDKDERKWFKVPSKKEETSTCIATPDVEKKEDLPTSSETF- 244

  Fly   845 ISINDEGV---------NILRKKRQRNLQKLGIGGFSVRNRGLKKDSEETTAVDQINSLMTMDKK 900
            :.::.|.|         :.|..||:.|..    ..|..:...|.|          |..|:. .|.
Human   245 VGLHVENVPKMVFPQPESTLSNKRKNNQG----NSFQAKRARLNK----------ITGLLA-SKA 294

  Fly   901 KKIIRKKQKNKLIEAYPVYLQEAFFGKPLLEGGELVMADTDSSDEIDASMKVYFTRPEGKSPANQ 965
            ..:...::|....|..|: |::|...||          .:...:|.|.|......:|...|    
Human   295 VGVDGAEKKEDYNETAPM-LEQAISPKP----------QSQKKNEADISSSANTQKPALLS---- 344

  Fly   966 DTLAVNKSPAK-----------TVKKVKAELKTE----NKTVFIQQMPMGIQNKNGTTPVSNVFD 1015
            .||:..|:.:|           .:|..|:.|..|    .....:.|:...:.||  |:|...|..
Human   345 STLSSGKARSKKCKHESGDSSGCIKPPKSPLSPELIQVEDLTLVSQLSSSVINK--TSPPQPVNP 407

  Fly  1016 PLQAEISNTVFANRHPLDALASPNVPELDMANSVSTVPSAEVIEKPMRESPAVLVDSFMVPNQLP 1080
            |...:.|.    .|.....||:..:|:             :.:||....|||.....|.:.:|..
Human   408 PRPFKHSE----RRRRSQRLATLPMPD-------------DSVEKVSSPSPATDGKVFSISSQNQ 455

  Fly  1081 QEQKF-------HNQL-YLG---------GNTLVNP-AQQLQFRQQAPQNANKQNMQTIMSQVVL 1127
            ||...       |..| .||         |:.:..| |....:|.:.|: |.|::.|.:      
Human   456 QESSVPEVPDVAHLPLEKLGPCLPLDLSRGSEVTAPVASDSSYRNECPR-AEKEDTQML------ 513

  Fly  1128 QTEKRPEEEQKVV-----EPVTETLNAGTQKTAEKMRKDEDLGLMATISAVLYANTEHPNLKELF 1187
                 |....|.:     .|..    ||..||.:|::.:                          
Human   514 -----PNPSSKAIADGRGAPAA----AGISKTEKKVKLE-------------------------- 543

  Fly  1188 PIWNDRCKQILKRWRSLCNEKKAPFLQKAKDNRSALRQRREQNKIPMPPKPQKQEEMGRVWKQPP 1252
                               :|.:....|.|:.....|::|:::.  ..||.:|:::..:..||  
Human   544 -------------------DKSSTAFGKRKEKDKERREKRDKDH--YRPKQKKKKKKKKKSKQ-- 585

  Fly  1253 KLKEDQPNMFVTYNGNAYDMGNYVGGSAQAASNNPNPHHVMPNVNDNLVIKATMQRTQVHTTAAS 1317
                             :|..:|...|.:......:|                :.|:...:.|:.
Human   586 -----------------HDYSDYEDSSLEFLERCSSP----------------LTRSSGSSLASR 617

  Fly  1318 TL---KMTTVDNRLELNTAVYGTEPIGDKKLRNLLQKNSTEPMLMGAN 1362
            ::   |.||......:.:.....|.:.|.   :.|..:|||.:|:..:
Human   618 SMFTEKTTTYQYPRAILSVDLSGENLSDV---DFLDDSSTESLLLSGD 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LptNP_611847.2 ePHD1_KMT2C_like 109..191 CDD:277135
PHD1_KMT2C_like 205..250 CDD:276984
PHD2_KMT2C_like 252..298 CDD:276985
PHD_SF 337..392 CDD:304600
PHD4_KMT2C_like 530..578 CDD:276987
PHD5_KMT2C_like 580..625 CDD:276988
PHD6_KMT2C_like 657..707 CDD:276989 11/44 (25%)
NHP6B 1101..>1237 CDD:227935 18/140 (13%)
HMG 1173..1231 CDD:197700 5/57 (9%)
PHF20L1XP_011515377.1 MBT 3..68 CDD:302657 13/57 (23%)
TUDOR 90..135 CDD:119391 5/44 (11%)
DUF3776 214..322 CDD:289391 23/134 (17%)
PHD20L1_u1 323..388 CDD:293265 13/68 (19%)
PHD_PHF20L1 688..733 CDD:277103
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.030

Return to query results.
Submit another query.