DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lpt and phf20b

DIOPT Version :9

Sequence 1:NP_611847.2 Gene:Lpt / 37795 FlyBaseID:FBgn0263667 Length:1482 Species:Drosophila melanogaster
Sequence 2:XP_005162050.1 Gene:phf20b / 445482 ZFINID:ZDB-GENE-040822-33 Length:1030 Species:Danio rerio


Alignment Length:1174 Identity:218/1174 - (18%)
Similarity:372/1174 - (31%) Gaps:398/1174 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   367 DEEADLTAYHKKKEQNPDYDYVCPNCKSNSS--------GPGSSQQTIDSIVL--------SAMD 415
            :::|...|...:||..|..:   .|.:.|||        |...|:...|:.|:        ....
Zfish   146 NQQARKRADQNEKELKPKEN---GNSRHNSSRHSVSDHDGESESEADEDTTVMDESTDLQNGGEK 207

  Fly   416 SSSEQLSLKEIELDPLEGKPTMD---PSSDELHKLPTGKKKVCLTSVR------GRSGKFVLHRM 471
            .|:|...:.:.|:...|.:|:.|   ||.|:...|..|..::.:....      |:....|||. 
Zfish   208 ESTETKMVNDSEVSSAEHQPSEDQNQPSEDKTENLENGNVEIKIEEEEEEEMDGGQEEAKVLHN- 271

  Fly   472 GV----------------MSQINKKRSTRGKGRQLALPTISSDRCLSRSMETDLTSDKKLLLCSA 520
            |:                :.:..:.|:..||..::    ::......|...|..||..|      
Zfish   272 GIDKNDEHKGEASDESPSLPKRTRSRTADGKEAEM----VNGPELRKRRASTGQTSPAK------ 326

  Fly   521 RDKFIQAQDICVMCGSLGIESDSVMITCAQCGQCYHPYCAGVKPSRGILQKGWRCLDCTVCEGCG 585
            |.:...:.|.........::||||..|.....:...|  || ||:              ..|..|
Zfish   327 RSRANSSTDRNTQTPIKPVKSDSVPDTLDIKDEKTSP--AG-KPA--------------PAEEAG 374

  Fly   586 KKNDEARLLLCDECDISYHIYCVNPPLETVPTGNWKCSFCTLCQKCGRNPTEK----------SE 640
            ...:.|..|     ....|:          ||.|          |..|.|..:          |.
Zfish   375 STPELAAAL-----KRQVHL----------PTTN----------KYSREPLYRVIKNQPPPILSI 414

  Fly   641 FGDSNMLECPSCTSQSSCPVCKVSYSNGEMIIQCEHCELWAHFHCDSVNAQLTIDHYDNNVYKCF 705
            ..|.|..:|....       |..|:....::          |:|....:||     .|.:..:|.
Zfish   415 ELDHNPFKCKMAG-------CLKSFRKASLL----------HYHMKYYHAQ-----SDPSPPRCV 457

  Fly   706 KCRCSTRSTNSLADAKFGNEDSLAITPQGSKPFVHITASSGPSFDSKSGAERNHPTLSGDMPESA 770
            :.|.|.:.:.|..            ||:..:.......:..|..|||||..              
Zfish   458 QTRSSDKQSPSQE------------TPRRRRTVSASHHTPSPLSDSKSGHS-------------- 496

  Fly   771 PEALHWIDGVCLSESGLGMIKSLSTEIKRKRKMRQA-LG--NGKDGQLEAAAEEALEKYKDGMVW 832
                       ||...:|:          |.:.|.| ||  ..|:.|:   ...:|...:|   |
Zfish   497 -----------LSPPAVGI----------KHRQRSATLGAERSKENQV---FNRSLHDDRD---W 534

  Fly   833 DGTENAIPEGFTISINDEGVNILRKKRQRNLQKLGIGGFSVRNRGLKKDSEETTAVDQINSLMTM 897
            ...|.|:.|.          ..||:||||...::.:.....:.|..|.||..|            
Zfish   535 VAKETALKER----------ERLREKRQREFFRIKLKKKKKKKRKSKSDSHST------------ 577

  Fly   898 DKKKKIIRKKQKNKLIEAYPVYL---QEAFFG---KPLLEGGELVMADTDSSDEIDASMKVYFTR 956
              ::.|..|.....|..|:.:.|   ..::.|   :.:|..||      |||.::.:...|:   
Zfish   578 --EESIGPKPLPCNLNSAHKLPLSLTHRSYTGHGPEKMLSQGE------DSSSDLSSDSPVW--- 631

  Fly   957 PEGKSPANQD-TLAVNKSPAKTVK------KVKAELKTENKTVFIQQMPMGIQNKNGTTPVSNVF 1014
            .|.:|....| .:.:::...:||.      :...|::.||.  |:.|....:..::||..     
Zfish   632 SEDESDTELDLNVPLSEQGVETVTHSSEIVRCICEVQEEND--FMIQCDECLCWQHGTCM----- 689

  Fly  1015 DPLQAEISNTVFANRHPLDALASPNVPELDMANSVSTVPSAEVIEKPMRESPAVLVDSFMVPNQL 1079
                               .|...:||:         ..|..:...|              |.|.
Zfish   690 -------------------GLYEDSVPD---------SYSCYICRDP--------------PAQR 712

  Fly  1080 PQEQKFHNQLYLGGNTLVNPAQQLQFRQQAPQNANKQNMQTIMSQVVLQTEKRPEEEQKVVEPVT 1144
            ..::.::::.:|....:..    |.|.:   :|.:.||.:.:.:...|..:         |..|.
Zfish   713 QSQRYWYDKDWLSSGHMYG----LSFLE---ENYSHQNSKKVTAAHQLLGD---------VHRVF 761

  Fly  1145 ETLNAGTQKTAEKMRKDEDLGLMATISAVLYANTEHPNLKELFPIWNDRCKQILKRWRSLCNEKK 1209
            |.||                ||...:|  :.....||:||    :|.       :.|:       
Zfish   762 EVLN----------------GLQLKMS--ILQTQAHPDLK----LWR-------QPWK------- 790

  Fly  1210 APFLQKAKDNRSALRQRREQNK---IPMPPKPQKQEEMGRVWKQPPKLKEDQPNMFVTYNGNAYD 1271
                     :...||:|...:.   .|:||.|   .|||.  .:...||.:.|:...|:   ...
Zfish   791 ---------HADGLRRRMAGDSGIATPLPPSP---PEMGE--NEFETLKSEAPSPMETH---CSF 838

  Fly  1272 MGNYVGGSAQAASNNPNPHHVMPNVNDNLVIKATMQRTQVHTTAASTLK--MTTVDNRLELNTAV 1334
            ..:|:  |::.....|..::  |.|...||         |.|...|.|:  :.:.::.||:....
Zfish   839 QDSYI--SSEHCYQKPRTYY--PAVERRLV---------VETRGGSELEDSLRSTEDLLEMAEQR 890

  Fly  1335 YGTE------PIGDKKLRNLLQKNSTEPMLMGANSDLFLGNDVMRLGMMQNTPITQNNPMLSISG 1393
            |||:      .:.|:.....|:  |....|:.|..:...|.::..   .:..|:|.:        
Zfish   891 YGTQLDHDQHKLADRSFSKELE--SRMKRLVSAEQEKSCGVEIKE---EEPDPVTPD-------- 942

  Fly  1394 KSQPSEGRSLEQDVKLGEPQEATSSAVELENVGFSDLLGGLGEGDDDDLLKSLTSEMGDDFNILE 1458
             .:|.....|.|..:|...:..  .||:.|.....||:     ..:.|:|:|.....|:    ||
Zfish   943 -PKPDPDLVLHQQWQLNLLEHI--EAVQDEVTHRMDLI-----ERELDVLESWLDYTGE----LE 995

  Fly  1459 YADP 1462
            ..||
Zfish   996 PPDP 999

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LptNP_611847.2 ePHD1_KMT2C_like 109..191 CDD:277135
PHD1_KMT2C_like 205..250 CDD:276984
PHD2_KMT2C_like 252..298 CDD:276985
PHD_SF 337..392 CDD:304600 5/24 (21%)
PHD4_KMT2C_like 530..578 CDD:276987 10/47 (21%)
PHD5_KMT2C_like 580..625 CDD:276988 8/44 (18%)
PHD6_KMT2C_like 657..707 CDD:276989 8/49 (16%)
NHP6B 1101..>1237 CDD:227935 25/138 (18%)
HMG 1173..1231 CDD:197700 9/57 (16%)
phf20bXP_005162050.1 MBT 1..68 CDD:302657
TUDOR 90..135 CDD:119391
PHD_PHF20 662..705 CDD:277104 11/77 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

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