DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lpt and baz-2

DIOPT Version :9

Sequence 1:NP_611847.2 Gene:Lpt / 37795 FlyBaseID:FBgn0263667 Length:1482 Species:Drosophila melanogaster
Sequence 2:NP_498673.3 Gene:baz-2 / 176078 WormBaseID:WBGene00001470 Length:1390 Species:Caenorhabditis elegans


Alignment Length:368 Identity:68/368 - (18%)
Similarity:123/368 - (33%) Gaps:137/368 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 CQICRQQDSNDTKYVKCEQCQKTYHASCLRPVISAIPKYGWKCNRCRVCTDCGSRTPGGGSSSRW 317
            ||||:..|.::  .:.|:.|:...|..|.||.::.:|:..|.|.|||                  
 Worm  1103 CQICKSMDGDE--MLVCDGCESGCHMECFRPRMTKVPEGDWFCQRCR------------------ 1147

  Fly   318 HSHYTICDSCYQQRNKGFSCPICQKAYRAASHKEMVKCSWCNKFVHSTCDEEADLTAYHKKKEQN 382
                        :...|  .|:|....|...:  :.:|..|...||..|.::.      .|:..|
 Worm  1148 ------------EEKSG--RPMCMFCSRETGN--LHQCQRCAYHVHQECSQDG------PKEAIN 1190

  Fly   383 PDYDYVCPNCKSNSSGPGSSQQTIDSIVLSAMDSSSEQLSLKEIELDPLEGKPTMDPSSDELHKL 447
            |: .::|.:|:..     ...:.:..::|.   |.||:..|::            |..::.....
 Worm  1191 PE-TFICGHCQEM-----KQMRFVKRLILR---SESEERELED------------DNHAENGENT 1234

  Fly   448 PTGKKKVCLTSVRGRSGKFVLHRMGVMSQINKKRSTRGK-GRQLALPTISSDRCLSRSMETDLTS 511
            ..|       .:.|.:|...:   ||.:|.|   ..:|. .|:|.:|:|..   |.::|..:|..
 Worm  1235 KNG-------HMNGMNGAIAI---GVHNQQN---GVKGNLKRKLEVPSIGG---LPKNMNKELCQ 1283

  Fly   512 ---DKKLLLCSA-------------------------------RDKFIQ------AQDICVM--- 533
               |:.::..:|                               .:|.|.      |:||.:|   
 Worm  1284 LMLDELVVQANALPFLEPVNPKLVPGYKMIISKPMDLKTIRQKNEKLIYETPEDFAEDIELMFAN 1348

  Fly   534 CGSLGIESDSVMITCAQCGQCYHPYCAGVKPSRGILQKGWRCL 576
            |....|:...:    .:.|...|.:          .||.|:.|
 Worm  1349 CRQFNIDHSEI----GRAGISLHKF----------FQKRWKQL 1377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LptNP_611847.2 ePHD1_KMT2C_like 109..191 CDD:277135
PHD1_KMT2C_like 205..250 CDD:276984
PHD2_KMT2C_like 252..298 CDD:276985 14/44 (32%)
PHD_SF 337..392 CDD:304600 12/54 (22%)
PHD4_KMT2C_like 530..578 CDD:276987 10/50 (20%)
PHD5_KMT2C_like 580..625 CDD:276988
PHD6_KMT2C_like 657..707 CDD:276989
NHP6B 1101..>1237 CDD:227935
HMG 1173..1231 CDD:197700
baz-2NP_498673.3 FlgD 35..88 CDD:281896
HAT_MBD 328..401 CDD:238691
DDT 524..>564 CDD:295426
WHIM1 622..670 CDD:292246
WHIM3 899..931 CDD:292248
PHD_BAZ2A_like 1102..1146 CDD:277020 14/44 (32%)
PHD 1155..1199 CDD:214584 11/52 (21%)
Bromo_BAZ2A_B_like 1278..1374 CDD:99935 15/109 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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