DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lpt and met-1

DIOPT Version :9

Sequence 1:NP_611847.2 Gene:Lpt / 37795 FlyBaseID:FBgn0263667 Length:1482 Species:Drosophila melanogaster
Sequence 2:NP_491340.2 Gene:met-1 / 172026 WormBaseID:WBGene00016603 Length:1604 Species:Caenorhabditis elegans


Alignment Length:772 Identity:142/772 - (18%)
Similarity:245/772 - (31%) Gaps:225/772 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   610 PPLETVPTGNWKCSFCTLCQKCGRNPTEKSEFGDSNMLECPSCTSQSSCPVCKVSYSNGEMII-- 672
            ||....||..         .|.||.|..|:   |:|.|..||.:|........:...:.:.|:  
 Worm    39 PPAPQTPTKR---------AKRGRPPKIKT---DANTLNTPSTSSNLVDDKLLIESESQDSILTN 91

  Fly   673 --------QCEHCELWAHFHCDSVNAQLTIDHYDNNVYKCFKCRCSTR---STNS---------- 716
                    :.|..|..:....|.:|:       ........|.|.|||   .|:.          
 Worm    92 EADSFLEKEVEEIEDSSDILPDKINS-------PEKPSVLVKRRSSTRLKVKTDEDEKDVPVNIE 149

  Fly   717 ---LADAKFGNEDSLAITPQGSKPFVHITASSGPSFDS-KSGAERNHPTLSGDMPESAPEALHWI 777
               |.:.....|.:....|:..:|    :.||.|..:. :...|.|.||.|.|.|.|        
 Worm   150 VAVLEEKSIQIEPTSPAHPEDPQP----STSSLPLVEPIEDIVEPNEPTSSADPPVS-------- 202

  Fly   778 DGVCLSESGLGMIKSLSTEIKRKRKMRQALGNGKDGQLEAAAEEALEKYKDGMVWDGTE---NAI 839
                       .||  ..:||.:..:.:...:.:...::.|..|:      |...|.:|   ..|
 Worm   203 -----------NIK--DEDIKEEEPLIKKPASDESESMDIANSES------GNDSDSSEADPRTI 248

  Fly   840 PEGFTISINDEGVNILRKKRQRNLQKLGIGGFSVRNRGLKKDSEETTAVDQINSLMTMDKKKKII 904
            | .|:|.:.|        ....|..|.|               |....|||.||..:.:.:....
 Worm   249 P-SFSIPLPD--------TPPPNFAKRG---------------EIHVDVDQKNSKQSGESQSPWE 289

  Fly   905 RKKQKNKLIEAYPVYLQEAFFGKPLLEGGELVMADTDSSDEIDASMKVYFTRPEGKSPANQDTLA 969
            |.::|:                           |....|....:..:::|..|..:|..|.   :
 Worm   290 RAREKS---------------------------ASNPLSSPTMSRPRIHFLHPAYQSFTND---S 324

  Fly   970 VNKSPAKTVKKVKAELKTEN-------------------KTVFIQQ-----------MPMGIQNK 1004
            |:..|....:...|..|.||                   ||...:|           ..:.:...
 Worm   325 VSPLPPPPPEPAPAREKVENGGPTTFKMTFKKAANIPILKTSAFEQPSSPPPSSSVSSSISLSEV 389

  Fly  1005 NGTTPVSNVFDPLQAEISNTVFANRHPLDALASPNVPELDMANSVSTVPSAEVIEKPMRESPAVL 1069
            |.:|.:::...|.:.. ||......:.|.......:|:|...|....|.|||.......|.|.:|
 Worm   390 NSSTSIASESSPAKRS-SNFDLTASNELPPPQMVELPKLSFFNMPPAVRSAEDDSAMTSEEPILL 453

  Fly  1070 VDSFMVPNQLPQEQKFHNQLYLGGNTLVNPAQQLQFRQQAPQNANKQNMQTI-----MSQVVLQT 1129
            :.|   ||....:.   :.|:|   |...|.:..:...||.:.|.::..|.|     ..:.|...
 Worm   454 LRS---PNSATPDD---DALFL---TTPPPPKMTESEIQALKVATEKVNQVIARREDSEKDVRHR 509

  Fly  1130 EKRPEEEQKVVEPVTETLNAGTQKTAEKMRKDEDLGLMATISAVLYANTEHPNLKELFPIWNDRC 1194
            |.|.:.:::..:....:....:::..::.|:.||....|                      .:|.
 Worm   510 EDRDDYDRRRDDRDRRSRKTDSERNDQRGRQREDDERRA----------------------RERE 552

  Fly  1195 KQILKRWRSLCNEKKAPFLQKAKDNRSALRQRREQNKIPMPPKPQKQEEMGRVWKQPPKLKEDQ- 1258
            :::.||..   .|::...|||.||.....:...|:.:.....|.||::| .::.::..|:||:: 
 Worm   553 REVTKRHD---REREEMRLQKQKDEERRKKDEEERIQKENDEKKQKEDE-AKMEEEKKKIKEEEM 613

  Fly  1259 ---------PNMFVTYNGNAYDMGNYVGGSAQAASNNPNPHHVMPNVNDNLVIKATM 1306
                     .:.::|.|.|          ..:..|.....|....|.:||..:...|
 Worm   614 KIPEFELISESKYLTRNAN----------KKKTESLTCECHRTGGNCSDNTCVNRAM 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LptNP_611847.2 ePHD1_KMT2C_like 109..191 CDD:277135
PHD1_KMT2C_like 205..250 CDD:276984
PHD2_KMT2C_like 252..298 CDD:276985
PHD_SF 337..392 CDD:304600
PHD4_KMT2C_like 530..578 CDD:276987
PHD5_KMT2C_like 580..625 CDD:276988 4/14 (29%)
PHD6_KMT2C_like 657..707 CDD:276989 5/59 (8%)
NHP6B 1101..>1237 CDD:227935 22/140 (16%)
HMG 1173..1231 CDD:197700 10/57 (18%)
met-1NP_491340.2 PHA03283 <219..308 CDD:223032 23/145 (16%)
AWS 637..682 CDD:197795 6/24 (25%)
SET 694..810 CDD:214614
tolA_full <1300..>1375 CDD:274303
WW 1366..1393 CDD:238122
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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