DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lpt and kmt2d

DIOPT Version :10

Sequence 1:NP_611847.2 Gene:Lpt / 37795 FlyBaseID:FBgn0263667 Length:1482 Species:Drosophila melanogaster
Sequence 2:XP_009295228.1 Gene:kmt2d / 100536523 ZFINID:ZDB-GENE-060223-2 Length:4967 Species:Danio rerio


Alignment Length:1827 Identity:445/1827 - (24%)
Similarity:689/1827 - (37%) Gaps:634/1827 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 KVCCLCNLGEKSALGQGEILQLKAPAPAEIKDKYPTDR--LREDGSRLLYGPKQAASSSGDCHYE 90
            :.|.||:..|:|..|||| ||...|:         :||  |....|.|     .||.:.     :
Zfish    58 RACALCSCVERSLHGQGE-LQCFGPS---------SDRPSLESSVSTL-----PAAGND-----D 102

  Fly    91 LDKIGQPDVVHPAEFLDE-GFVYVHRMCIMWSLRKSQ-----ISDADGAYFATHFAEFLEQKCNF 149
            |..||..:....|...|: |..:||..|.:||....|     :.:.|.|..:.     :::.|::
Zfish   103 LSSIGFSESTCLASLFDDTGSCWVHHWCAVWSEGVEQTEGEVLINVDKAVVSG-----IQRPCDY 162

  Fly   150 CGRYGASINCKM-NCRQVHHWPCAAAAGCLLILESFTVFCTEHLSQVPVICSDNNVECLSCSSLG 213
            |.|.||:|.|:. .|.:.:|:||:||:|....::...:.|.||:.:...|..: ...|..|.|:|
Zfish   163 CKRMGATIRCRAEGCSRFYHFPCSAASGSFQSMKQLALLCPEHIDKAEEIAGE-EARCAVCDSVG 226

  Fly   214 DLSKLIMCSTCGDHFHSTCIGLANLPDTRSGWNCARCTKCQICRQQDSNDTKYVKCEQCQKTYHA 278
            |||.|:.|:.||.|:|..|:.::..|..||||.|..|..||.|| |...|:|.:.|:.|.|.||.
Zfish   227 DLSGLLYCTGCGQHYHDACLEISATPLQRSGWQCPECKVCQTCR-QPGEDSKMLVCDACDKGYHT 290

  Fly   279 SCLRPVISAIPKYGWKCNRCRVCTDCGSR---TPGGGSSSRWHSHYTICDSCYQQRNKGFSCPIC 340
            .||.|.:.::|...|||.|||||.|||.|   .||   |.:|...||:|:.|  ||.:...|.:|
Zfish   291 FCLLPAMDSVPPDSWKCKRCRVCIDCGMRGLKLPG---SEQWFESYTVCEGC--QRRRTSVCGVC 350

  Fly   341 QKAYR---AASHKEMVKCSWCNKFVHSTC----------------------------------DE 368
            .||..   :..|    .|:.|:::|||.|                                  ||
Zfish   351 SKATEPSVSLQH----HCAICHRWVHSDCASLSGPPEEKCICVLCKEIPDEVSVEAEVSSMQVDE 411

  Fly   369 EADL------------------------------------------------------------- 372
            :.||                                                             
Zfish   412 KTDLEVPVELGTELEVVEIAEVKESIMEEALRPEGTEGSTEANVHTEVSTEQQPLLATVSDVDAK 476

  Fly   373 ---------TAYHKKKEQNPDYDYVCPNCKSNSSGPGS-----SQQTIDSIVLSAMDSSSEQLSL 423
                     |...:..||.|: |...|..|.:...|.|     :|..:....:...|.|.::...
Zfish   477 QKEDETTSETVVAEAVEQKPE-DTQDPPIKDSPDSPVSDTKEEAQSDVAGTNIKRQDESQDKPPQ 540

  Fly   424 KEIELD----PLEGKPTMDPSSD------------------------------------------ 442
            .|.|||    ..:.||...|.|.                                          
Zfish   541 SETELDGTVKSTKAKPPSSPCSQLSQITLPVAEEEEPVAMDLEEMGSQEETINRTPPSPAPHTEM 605

  Fly   443 ----------------------------------------------------------------- 442
                                                                             
Zfish   606 PTASDTDDRMGQSEDEEEEDEQGVEESLDDSLLKDESQCEEDQARKELQEDMKPELVLDETSNLS 670

  Fly   443 -----------------------ELHKLPTGKKK--VCLTSV------------------RGRSG 464
                                   ||..:|.|:.:  ..||..                  ||..|
Zfish   671 HGDESSSGFLGSPAEADSQMLSMELSLVPAGRTRSDSLLTETEDSLPFDPLKPDGEKVKRRGSPG 735

  Fly   465 KFVLHRMGVMSQINKKRSTRGKG--------------RQLA------LPTISSDRCLSR--SMET 507
            :..: :.|..|....||..||.|              :.:|      |.::::|..:|:  ..|.
Zfish   736 RSRM-KQGRGSGFPGKRRPRGGGSGGGGGRGRGRSRLKAMASCIDAFLLSMTADTGISKEEDEEE 799

  Fly   508 DLTSDKKLLLCSARDKFIQAQDICVMCGSLGIESDSVMITCAQCGQCYHPYCAGVKPSRGILQKG 572
            |.|....::|.|..|||:..||:||:|||.|...:..::.||||.|||||||...|.::.:|:||
Zfish   800 DDTMQNTVVLFSNTDKFVLQQDMCVVCGSFGQGVEGQLLACAQCAQCYHPYCVNSKITKMMLRKG 864

  Fly   573 WRCLDCTVCEGCGKKNDEARLLLCDECDISYHIYCVNPPLETVPTGNWKCSFCTLCQKCG-RNPT 636
            ||||:|.|||.|||.:|.:||||||:||:|||.||::|||:|||.|.|||.:|..|.:|| .:|.
Zfish   865 WRCLECIVCEVCGKASDPSRLLLCDDCDVSYHTYCLDPPLQTVPKGGWKCKWCVCCMQCGASSPG 929

  Fly   637 EKSEFGDSNMLECPSCTSQSSCPVCKVSYSNGEMIIQCEHCELWAHFHCDSVNAQLTIDHYDNNV 701
            ...|: .:|...|..|.|..:||||..::...|:::||:||:.|.|..|:|:..:..::...:..
Zfish   930 FHCEW-QNNYNHCGPCASLVTCPVCHENFMEEELLLQCQHCDRWVHAVCESLYTEDEVEQASDEG 993

  Fly   702 YKCFKCRCSTRSTNSLADAKFGNEDSLAITPQGSKPFVHITASSGPSFDSKSGAERNHPTLSG-D 765
            :.|..|                       ||...:|.|                  ..|.:|. .
Zfish   994 FACTAC-----------------------TPYVPRPVV------------------ESPMMSAFK 1017

  Fly   766 MPESAPEALHWIDGVCLSESGLGMIKSLS-TEIKRKRKMRQALG------------NGKDGQLEA 817
            :.|..|: .:.::||.|:|:|:.:::|:| :.:.::|:.|..||            :|.:|:..|
Zfish  1018 IKEPEPQ-FYRLEGVWLTETGMSLLRSISMSPLHKRRQRRSRLGTMSIDELKEGDADGDEGKGGA 1081

  Fly   818 AAEEALEKY-------KDGMV--WDGTENAIPEGFT--------ISINDEGVNILRKKRQRNLQK 865
            .|.|...|.       :||..  ..|.|..| ||..        :...|:|     |||:|...:
Zfish  1082 EAMECEPKSEAPGSPDRDGGADRETGPEGGI-EGMADCETLKGGVEETDDG-----KKRKRKPYR 1140

  Fly   866 LGIGGFSVRNR---------------GLKKDSEETTAVDQ---------INSLMTMD---KKKKI 903
            .|||||.||.|               |:.:.....|.:::         :....|.:   ::.|.
Zfish  1141 PGIGGFMVRQRKCHTRMRRSLSASGEGVPEGQAPETKLEEGPHPDIPLDVPEAKTAEGEGEQAKK 1205

  Fly   904 IRKKQKNKLIEAYPVYLQEAFFGKPLLEGGELVM---------------------ADTDSSDEID 947
            .|.::|:||.:.:|.|||||||||.||:..:...                     |.|.:|:.::
Zfish  1206 RRGRKKSKLEDMFPTYLQEAFFGKTLLDQSKRAFLAPPTPRHTQGLLRPPLPGLGARTAASESVE 1270

  Fly   948 ASMKVYFTRPEG----------KSPANQDTLAV---------NKSPAKTVKKVKAELKTENKTVF 993
            ::     .||.|          .|.|..|...|         ||..:.........||.::    
Zfish  1271 ST-----ARPSGLPMELKQEGEGSKATGDGAVVGSGATGQLFNKDQSSGAAHGSDMLKNKD---- 1326

  Fly   994 IQQMPMGIQNKN---------GTTPVSNVFDPLQAEISNTVFANRHPLDALASPN---VPELDM- 1045
               :|.|::.::         |.|..|:|...||..|.        |:.. ..||   .|:.:: 
Zfish  1327 ---LPQGLERQDSEQFFRKVLGPTEGSSVSGQLQPSIK--------PVQE-GDPNQSSCPQRNLL 1379

  Fly  1046 --ANSVSTVPSAEVIEKPMRESPAVLVDSFMVPNQLPQEQKFHNQLYLGGNTLVNPAQQLQFRQQ 1108
              |:...|:||..            ::|||...:|.|    |.:....||  |.:|.|..:....
Zfish  1380 PGASLSGTLPSTG------------MMDSFSGLSQSP----FFDLRDRGG--LFSPDQDEESPWA 1426

  Fly  1109 APQNANKQNMQTIMSQVVLQTEKRPEEEQKVVEPVTETLNAG-----TQKTAEKMRKDEDLGLMA 1168
            .|                 .|...|.      .|.|.|...|     .|::.::..|||:||.::
Zfish  1427 TP-----------------STPATPS------TPPTPTEQEGDGLSYNQRSLQRWEKDEELGNLS 1468

  Fly  1169 TISAVLYANTEHPNLKELFPIWNDRCKQILKRWRSLCNEKKAPFLQKAKDNRSALR----QRREQ 1229
            |||.|||||...|:||:.:|.|..|||||:|.||.:....|.|:||||||||:|.|    |::.:
Zfish  1469 TISPVLYANMNFPSLKQDYPDWASRCKQIMKIWRKVSAADKVPYLQKAKDNRAAQRINKAQKQAE 1533

  Fly  1230 NKIPMPPKPQKQEEMGRVWKQPPKLKEDQPNMFVTY---NGNAYDMGNYVGGSAQAASNNPNPHH 1291
            :::..|.|           .:|.::|.::||:.:..   :|:       |..|:|.:|.. :|:.
Zfish  1534 SQVCRPIK-----------TEPGRIKGERPNLHLQIPPPSGS-------VSTSSQPSSAE-SPYT 1579

  Fly  1292 VMPNVNDNLVIKATMQRTQVHTTAASTL------KMTTVDNRLELNTAVYGTEPIGDKKLRNLLQ 1350
            :.|:...:    |......:.|..::.|      |:::....|:...:...::|           
Zfish  1580 LAPDSASS----AFFPDGPLKTPCSADLQADPFSKLSSQSPHLQSQPSTPYSQP----------- 1629

  Fly  1351 KNSTEPMLMGANSDLFLGNDVMRLGMMQNTPITQNNPMLSISGKSQPSEGRSLEQ-------DVK 1408
              |:.|:...::.....|..          ..||..|....|.:.||...|..:|       ..:
Zfish  1630 --SSSPLPASSSGHCMPGPQ----------GATQGRPSSFGSLEMQPGATRRAQQVDPFFRPQQQ 1682

  Fly  1409 LGEPQEA 1415
            :.:||||
Zfish  1683 IPKPQEA 1689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LptNP_611847.2 ePHD1_KMT2C_like 109..191 CDD:277135 24/87 (28%)
PHD1_KMT2C_like 205..250 CDD:276984 20/44 (45%)
PHD2_KMT2C_like 252..298 CDD:276985 19/45 (42%)
PHD_SF 337..392 CDD:473978 21/161 (13%)
PHD4_KMT2C_like 530..578 CDD:276987 25/47 (53%)
PHD5_KMT2C_like 580..625 CDD:276988 30/44 (68%)
PHD6_KMT2C_like 657..707 CDD:276989 14/49 (29%)
NHP6B 1101..>1237 CDD:227935 49/144 (34%)
HMG_KMT2C-like 1157..1223 CDD:438813 36/65 (55%)
kmt2dXP_009295228.1 PHD_SF 122..205 CDD:473978 24/87 (28%)
PHD1_KMT2C_like 218..263 CDD:276984 20/44 (45%)
PHD_SF 265..310 CDD:473978 19/45 (42%)
PHD 346..391 CDD:214584 11/48 (23%)
DUF612 <401..>613 CDD:282585 24/212 (11%)
PHD_SF 821..871 CDD:473978 26/49 (53%)
PHD5_KMT2C_like 872..918 CDD:276988 30/45 (67%)
PHD5_KMT2D 949..999 CDD:277074 14/49 (29%)
HMG-box_KMT2D 1447..1530 CDD:438836 39/82 (48%)
PHA03247 <1559..1927 CDD:223021 28/166 (17%)
PHA03247 <1750..2209 CDD:223021
Med15 2957..>3361 CDD:312941
Med15 3286..>3690 CDD:312941
PHD_SF 4462..4568 CDD:473978
FYRN 4611..4662 CDD:461787
FYRC 4668..4752 CDD:461788
SET_KMT2C_2D 4814..4966 CDD:380948
Blue background indicates that the domain is not in the aligned region.

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