DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lpt and nsd3

DIOPT Version :9

Sequence 1:NP_611847.2 Gene:Lpt / 37795 FlyBaseID:FBgn0263667 Length:1482 Species:Drosophila melanogaster
Sequence 2:XP_005155379.1 Gene:nsd3 / 100006350 ZFINID:ZDB-GENE-050324-2 Length:1563 Species:Danio rerio


Alignment Length:860 Identity:167/860 - (19%)
Similarity:264/860 - (30%) Gaps:353/860 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 CNFCGRYGAS-INCKMNCRQVHHWPCAAA-AGCLLILESFTVFCTEHLSQVPVICSDNNVECLSC 209
            |:.|..:|.| ::|:.:|.::.|..|..: :|    .||.|| |.|        |...:..|.||
Zfish   814 CHVCETFGDSLVSCEGDCNRLFHPECMGSNSG----KESETV-CQE--------CK
TGSHPCFSC 865

  Fly   210 S-SLGDLSKLIMCST--CGDHFHSTCI----GLANLPDTRSGWNCAR--CTKCQICRQ-QDSNDT 264
            . :.||:.:   ||.  ||.::|.||:    |.|:  ||: |..|.:  |..|.:.|. |.:...
Zfish   866 KVTEGDMKR---CSVNGCGRYYHETCVRKYTGSAS--DTK-GLRCPQH
SCATCCLDRDLQKAGKG 924

  Fly   265 KYVKCEQCQKTYHA--SC-------LRPVI---------------SAIPKYGWKCNRCRVCTD-- 303
            :.::|.:|...||.  .|       :.|.|               |:....||    |.:|..  
Zfish   925 RMMRCIRCPVAYHTGDGCVAAGSVLITPHIIICSNHSSSRKNGHFSSPVNVGW----CFICARGL 985

  Fly   304 -CGSRTPGGGSSSRWHSHYTICDSCYQQRNKGFSCP----------------ICQKAYRAASHKE 351
             ....|....||..:.|||.:.:|...:..|....|                :|.:|..|:.|.|
Zfish   986 LVHDHTDTILSSYTFKSHYLLTESNRAELMKLPMIPSSSSATKKNIGKGGRLLCCEACPASFHPE 1050

  Fly   352 MVK---------CSWC------------------------------------------------- 358
            .:|         |..|                                                 
Zfish  1051 CLKIEMPEGTWLCGECKSGKKPHYKQIVWVKLGNYRWWPAEICNPRLVPSNIQSLKHDIGDFPVF 1115

  Fly   359 --------------------------------NKFVHSTCDEEA----DLTAYHKKKE------- 380
                                            ||......:|.|    :|.|..:.||       
Zfish  1116 FFGSHDYYWINQGRVFPYVESDKNFAEGQVGINKTFKKALEEAAKRFQELKAQRETKEALEQERN 1180

  Fly   381 --QNPDYDYV---------------------CPNCKSNSSGPGSSQQTIDSIVLSAMDSSSEQLS 422
              :.|.|..:                     | |||.....|.|.    ||..|:.|..      
Zfish  1181 SRRPPPYKLIKSNKPFGKVQLHVADLSEIPRC-NCKPTDERPCSQ----DSQCLNRMLQ------ 1234

  Fly   423 LKEIELDPLEGKPTMDPSSDELHKLPTGKK-----KVCLTSVRG---------RSGKFVLHRMG- 472
                    .|..|.:.|:.|..|.....|:     :|..|:.||         :.|.||:..:| 
Zfish  1235 --------YECHPQVCPAGDRCHNQCFSKRLYPDTEVIKTTGRGWGLKTKQDLKKGDFVMEYVGE 1291

  Fly   473 -VMSQINKKRSTRGKGRQLA---LPTISSDRC--------LSRSM--------ET---------- 507
             :.|:..|:|........:.   :.|::.||.        |||.|        ||          
Zfish  1292 LIDSEECKQRIRTANENHVTNFYMLTLTKDRVIDAGPKGNLSRFMNHSCSPNCETQKWTVNGDVR 1356

  Fly   508 -------DLTSDKKLLLCSARDKFIQAQDICVMCGS------LGIESDSVMITCAQCGQCYHPYC 559
                   |:::|.:|......|.....:..| .|||      ||::..|.::...:    .....
Zfish  1357 IGLFTLCDISADTELTFNYNLDCLGNGRTSC-HCGSENCSGFLGVKPKSAVVMERE----EKVRN 1416

  Fly   560 AGVKPSRGILQKGWRCLDCTVCEGCGKKNDEARLLLCD--ECDISYHIYCVNPPLETVPTGNWKC 622
            |.:||.:..|:...:......|..||:..:   |::||  :|..:||:.|:|  |...|.|.|:|
Zfish  1417 AKLKPKKRKLKTESKQTHELYCYCCGEGGE---LVMCDKKDCPKAYHLLCLN--LSKPPYGRWEC 1476

  Fly   623 SF--CTLCQKCGRNPTEKSEFGDSNMLECPSCTSQSSCPVCKVSYSNGEMIIQCEHCELWAHFHC 685
            .:  |::||:                      |:.|.|..|..|:        |...|       
Zfish  1477 PWHQCSVCQR----------------------TATSFCHFCPASF--------CREHE------- 1504

  Fly   686 DSVNAQLTIDHYDNNVYKCFKCRCSTRSTNSLADAKFGNEDSLAITPQGSKPFVHITASSGPSFD 750
               ..||.:...|..     .| ||            .::....:.||.::.  .:|....|...
Zfish  1505 ---RGQLAVSALDKQ-----PC-CS------------NHDPKRPLGPQANRS--QVTVKKEPLDG 1546

  Fly   751 SKSGAERNHPTLSGD 765
            :.:..|......:||
Zfish  1547 NANEEEEEEEEETGD 1561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LptNP_611847.2 ePHD1_KMT2C_like 109..191 CDD:277135 14/45 (31%)
PHD1_KMT2C_like 205..250 CDD:276984 18/53 (34%)
PHD2_KMT2C_like 252..298 CDD:276985 13/70 (19%)
PHD_SF 337..392 CDD:304600 20/194 (10%)
PHD4_KMT2C_like 530..578 CDD:276987 11/53 (21%)
PHD5_KMT2C_like 580..625 CDD:276988 16/48 (33%)
PHD6_KMT2C_like 657..707 CDD:276989 8/49 (16%)
NHP6B 1101..>1237 CDD:227935
HMG 1173..1231 CDD:197700
nsd3XP_005155379.1 PWWP 351..468 CDD:321985
PHD1_NSD3 813..856 CDD:277119 15/54 (28%)
PHD_SF 861..907 CDD:328929 18/51 (35%)
PHD3_NSD3 908..960 CDD:277125 11/51 (22%)
PHD4_NSD3 1033..1066 CDD:277128 7/32 (22%)
WHSC1_related 1072..1165 CDD:99899 4/92 (4%)
AWS 1208..1258 CDD:197795 16/68 (24%)
SET 1259..1382 CDD:214614 24/122 (20%)
PHD5_NSD3 1437..1479 CDD:277131 16/46 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4489
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

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